Metamenu

Effective results for Streptomyces sp. e14 (eggnog40)

Summary

Number of putative secreted proteins: 48
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 24 eukaryotic-like domains, contained in 48 proteins (0 high, 48 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
645465.SSTG_01323(PF11380) (PF17102) (PF17101) (PF17103)
645465.SSTG_01325(PF17103) (PF17101) (PF11380) (PF17102)
645465.SSTG_05770(PF17048)ER
645465.SSTG_01900(PF05719)ER
645465.SSTG_05453(PF02441)(mitochondrial)
645465.SSTG_00971(PF02441)ER
645465.SSTG_05515(PF14342)ER
645465.SSTG_04806(PF08124) (PF02884)plastid
645465.SSTG_03961(PF08031)mitochondrial; (mitochondrial)
645465.SSTG_05363(PF03644)mitochondrial
645465.SSTG_05128(PF00471)mitochondrial; not used
645465.SSTG_05338(PF00471)(mitochondrial); not used
645465.SSTG_00205(PF07721)(mitochondrial)
645465.SSTG_05824(PF00471)mitochondrial; not used
645465.SSTG_05768(PF08124) (PF02884)
645465.SSTG_04492(PF05719)(mitochondrial)
645465.SSTG_04869(PF16483)plastid
645465.SSTG_02135(PF08031)(ER)
645465.SSTG_03306(PF07721)
645465.SSTG_05895(PF02126)
645465.SSTG_05894(PF02126)
645465.SSTG_02776(PF02441)
645465.SSTG_02755(PF02441)
645465.SSTG_04365(PF05719)not used
645465.SSTG_01920(PF13499)
645465.SSTG_02949(PF09445)
645465.SSTG_05413(PF13499)
645465.SSTG_05412(PF13499)
645465.SSTG_04688(PF07224)
645465.SSTG_06185(PF02441)
645465.SSTG_04585(PF08031)
645465.SSTG_04587(PF08031)
645465.SSTG_04582(PF08031)
645465.SSTG_00036(PF02126)
645465.SSTG_05211(PF11338)
645465.SSTG_00135(PF14342)
645465.SSTG_03575(PF05719)
645465.SSTG_00324(PF02441)
645465.SSTG_04861(PF07721)
645465.SSTG_04472(PF11338)
645465.SSTG_03496(PF13499)
645465.SSTG_05342(PF16483)
645465.SSTG_00477(PF02945)
645465.SSTG_02897(PF03947)
645465.SSTG_04944(PF03947)not used
645465.SSTG_01256(PF01234)
645465.SSTG_04923(PF06884)
645465.SSTG_02851(PF00471)not used

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: NO (FDR = 0.5 %)
  • Functional Type III secretion system: N.D.
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: N.D.

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================