Metamenu

Effective results for Bacillus sp. 2_A_57_CT2 (eggnog40)

Summary

Number of putative secreted proteins: 186
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 40 eukaryotic-like domains, contained in 186 proteins (5 high, 181 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
665959.HMPREF1013_02417(PF01520) (PF08239)ER
665959.HMPREF1013_03548(PF02225) (PF06280)ER
665959.HMPREF1013_03286(PF02225) (PF06280)(ER)
665959.HMPREF1013_01606(PF06725) (PF01476)ER
665959.HMPREF1013_05041(PF13529) (PF08239)mitochondrial
665959.HMPREF1013_04771(PF01520) (PF08239)ER
665959.HMPREF1013_01544(PF06725) (PF01476)ER
665959.HMPREF1013_03786(PF06725) (PF01476)ER; (ER)
665959.HMPREF1013_04346(PF02225) (PF06280)ER
665959.HMPREF1013_01619(PF02225)ER
665959.HMPREF1013_02142(PF07670)ER
665959.HMPREF1013_02143(PF07670)ER
665959.HMPREF1013_04466(PF02416)ER
665959.HMPREF1013_01961(PF02416)ER
665959.HMPREF1013_00612(PF07670)ER
665959.HMPREF1013_01401(PF08239)ER
665959.HMPREF1013_01404(PF08239)ER
665959.HMPREF1013_01158(PF03447)ER; (ER)
665959.HMPREF1013_05094(PF15902)ER
665959.HMPREF1013_00630(PF05547)ER
665959.HMPREF1013_02883(PF06445)(mitochondrial)
665959.HMPREF1013_01231(PF13529)ER
665959.HMPREF1013_01808(PF01476)(mitochondrial)
665959.HMPREF1013_05035(PF02225)ER
665959.HMPREF1013_01018(PF03447)(ER)
665959.HMPREF1013_04193(PF05547)ER
665959.HMPREF1013_00739(PF08378)mitochondrial
665959.HMPREF1013_05012(PF02416)ER
665959.HMPREF1013_01292(PF07670)(ER); ER
665959.HMPREF1013_02381(PF15902)ER
665959.HMPREF1013_04460(PF06725)ER
665959.HMPREF1013_01709(PF03714)ER
665959.HMPREF1013_02281(PF01476)ER
665959.HMPREF1013_04117(PF02416)ER
665959.HMPREF1013_01517(PF08378)(mitochondrial)
665959.HMPREF1013_02865(PF08378)mitochondrial
665959.HMPREF1013_01746(PF02225)(ER)
665959.HMPREF1013_04136(PF07670)(ER)
665959.HMPREF1013_01537(PF01476)ER
665959.HMPREF1013_04340(PF05547)ER
665959.HMPREF1013_03517(PF01476)ER
665959.HMPREF1013_05106(PF13529)ER
665959.HMPREF1013_02132(PF01476)ER
665959.HMPREF1013_03999(PF01476)ER; (ER)
665959.HMPREF1013_02715(PF02225)ER; (ER)
665959.HMPREF1013_03773(PF07670)ER
665959.HMPREF1013_05384(PF03851)(mitochondrial)
665959.HMPREF1013_01405(PF08239)ER
665959.HMPREF1013_01142(PF02681)ER
665959.HMPREF1013_01144(PF06725)ER
665959.HMPREF1013_01083(PF02225)ER
665959.HMPREF1013_03106(PF01476)(ER)
665959.HMPREF1013_01495(PF13529)ER
665959.HMPREF1013_02005(PF02681)ER
665959.HMPREF1013_01725(PF07670)(mitochondrial)
665959.HMPREF1013_04758(PF13529)mitochondrial; (mitochondrial)
665959.HMPREF1013_00532(PF13529)ER
665959.HMPREF1013_00145(PF01476)ER
665959.HMPREF1013_05653(PF06725)mitochondrial
665959.HMPREF1013_02668(PF13529)ER
665959.HMPREF1013_03026(PF02416)ER
665959.HMPREF1013_00464(PF01476)ER
665959.HMPREF1013_00449(PF07670)ER
665959.HMPREF1013_02685(PF12606)ER
665959.HMPREF1013_04168(PF02416)ER
665959.HMPREF1013_04162(PF05547)(mitochondrial)
665959.HMPREF1013_00184(PF13551)(mitochondrial)
665959.HMPREF1013_00185(PF01520) (PF01476)
665959.HMPREF1013_00616(PF02416)ER; not used
665959.HMPREF1013_01403(PF01520) (PF08239)
665959.HMPREF1013_03664(PF13529)(ER)
665959.HMPREF1013_04769(PF02416)ER; not used
665959.HMPREF1013_05296(PF01520) (PF01476)
665959.HMPREF1013_05294(PF13551)(mitochondrial)
665959.HMPREF1013_05776(PF13551)(mitochondrial)
665959.HMPREF1013_01104(PF08378)(mitochondrial)
665959.HMPREF1013_02440(PF01476)(mitochondrial)
665959.HMPREF1013_03488(PF03447) (PF01958)
665959.HMPREF1013_00037(PF03447) (PF01958)
665959.HMPREF1013_02852(PF13551)(mitochondrial)
665959.HMPREF1013_03470(PF01476)(mitochondrial)
665959.HMPREF1013_05166(PF13551)(mitochondrial)
665959.HMPREF1013_01675(PF03851)
665959.HMPREF1013_03761(PF07670)
665959.HMPREF1013_03969(PF06777)
665959.HMPREF1013_01634(PF00477)
665959.HMPREF1013_01155(PF05598)
665959.HMPREF1013_00586(PF05598)
665959.HMPREF1013_04609(PF08713)
665959.HMPREF1013_01174(PF05598)
665959.HMPREF1013_05213PF04098
665959.HMPREF1013_02888(PF13427)
665959.HMPREF1013_02471(PF01476)
665959.HMPREF1013_00652(PF07670)
665959.HMPREF1013_00656(PF05598)
665959.HMPREF1013_04546(PF08713)
665959.HMPREF1013_02412(PF13921)
665959.HMPREF1013_03094(PF05598)
665959.HMPREF1013_01254(PF08378)
665959.HMPREF1013_04207(PF06445)
665959.HMPREF1013_05781(PF05598)
665959.HMPREF1013_01014(PF14748)
665959.HMPREF1013_01271PF05225
665959.HMPREF1013_03646(PF01520)
665959.HMPREF1013_04336(PF00772)
665959.HMPREF1013_00501(PF05598)
665959.HMPREF1013_03560(PF06445)
665959.HMPREF1013_03624(PF08378)
665959.HMPREF1013_04749(PF07670)
665959.HMPREF1013_04214(PF12867)
665959.HMPREF1013_05605(PF01520)
665959.HMPREF1013_05601(PF14748)
665959.HMPREF1013_05418(PF08892)
665959.HMPREF1013_00541(PF12867)
665959.HMPREF1013_00130(PF12867)
665959.HMPREF1013_03017(PF08892)
665959.HMPREF1013_01881(PF12787)
665959.HMPREF1013_03220(PF12867)
665959.HMPREF1013_01574(PF01476)
665959.HMPREF1013_00111(PF06445)
665959.HMPREF1013_01763(PF08378)
665959.HMPREF1013_04113(PF13911)
665959.HMPREF1013_03855(PF12638)
665959.HMPREF1013_02867(PF06445)
665959.HMPREF1013_03500(PF05598)
665959.HMPREF1013_01345(PF01969)
665959.HMPREF1013_03260(PF03447)
665959.HMPREF1013_05307(PF01476)
665959.HMPREF1013_03794(PF01476)
665959.HMPREF1013_03240(PF08713)
665959.HMPREF1013_02325(PF00772)
665959.HMPREF1013_01477(PF06445)
665959.HMPREF1013_05772(PF05598)
665959.HMPREF1013_04698(PF00091)
665959.HMPREF1013_02771(PF05547)
665959.HMPREF1013_02776(PF05598)
665959.HMPREF1013_01455(PF01520)
665959.HMPREF1013_03755(PF01476)
665959.HMPREF1013_03288(PF12867)
665959.HMPREF1013_03289(PF12867)
665959.HMPREF1013_00416(PF00091)
665959.HMPREF1013_02367(PF14748)
665959.HMPREF1013_03141(PF12867)
665959.HMPREF1013_05737(PF01476)
665959.HMPREF1013_01608(PF00091)
665959.HMPREF1013_03460(PF12867)
665959.HMPREF1013_01402(PF08239)not used
665959.HMPREF1013_03123(PF08378)
665959.HMPREF1013_05248PF05225
665959.HMPREF1013_04046(PF16114)
665959.HMPREF1013_02190(PF14748)
665959.HMPREF1013_04453(PF12867)
665959.HMPREF1013_01996(PF03714)
665959.HMPREF1013_04362(PF12867)
665959.HMPREF1013_05200(PF00091)
665959.HMPREF1013_04001(PF03630)
665959.HMPREF1013_01220(PF05598)
665959.HMPREF1013_01810(PF00772)
665959.HMPREF1013_05221(PF05598)
665959.HMPREF1013_05792(PF08239)not used
665959.HMPREF1013_05790(PF05598)
665959.HMPREF1013_04776PF04098
665959.HMPREF1013_00727(PF05598)
665959.HMPREF1013_02582(PF12787)
665959.HMPREF1013_00535(PF01476)
665959.HMPREF1013_01343(PF01969)
665959.HMPREF1013_02620(PF05598)
665959.HMPREF1013_01896(PF05598)
665959.HMPREF1013_03237(PF13427)
665959.HMPREF1013_03230(PF12867)
665959.HMPREF1013_01718(PF08713)
665959.HMPREF1013_03450(PF05598)
665959.HMPREF1013_02641(PF08378)
665959.HMPREF1013_02640PF00609
665959.HMPREF1013_00905(PF12787)
665959.HMPREF1013_01755(PF06445)
665959.HMPREF1013_04485(PF05598)
665959.HMPREF1013_02125(PF01476)
665959.HMPREF1013_00442(PF13921)
665959.HMPREF1013_00863(PF00772)
665959.HMPREF1013_01301(PF01520)
665959.HMPREF1013_05151(PF15902)
665959.HMPREF1013_05485(PF13921)
665959.HMPREF1013_04434(PF12867)
665959.HMPREF1013_05745(PF05598)
665959.HMPREF1013_02914(PF12867)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: NO (FDR = 0.5 %)
  • Functional Type III secretion system: N.D.
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: N.D.

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================