Effective results for Streptomyces avermitilis MA-4680 = NBRC 14893 (eggnog40)
Summary
Number of putative secreted proteins: 350
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 74 eukaryotic-like domains, contained in 350 proteins (17 high, 333 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None
Protein based results
Putative secreted proteins (weak evidence indicated by parentheses)
| Protein | EffectiveT3 | EffectiveCCBD | T4SEpre | EffectiveELD | Predotar |
|---|---|---|---|---|---|
| 227882.SAV_2895 | (PF02801) (PF14765) (PF00550) (PF16197) (PF00975) (PF00698) (PF08659) (PF00109) | ||||
| 227882.SAV_943 | (PF02801) (PF00698) (PF00550) (PF16197) (PF00975) (PF14765) (PF08659) (PF00109) | ||||
| 227882.SAV_2899 | (PF02801) (PF14765) (PF00550) (PF16197) (PF00698) (PF08659) (PF00109) | ||||
| 227882.SAV_2892 | (PF02801) (PF00698) (PF00550) (PF16197) (PF14765) (PF08659) (PF00109) | ||||
| 227882.SAV_2893 | (PF02801) (PF14765) (PF00550) (PF16197) (PF00698) (PF08659) (PF00109) | ||||
| 227882.SAV_2897 | (PF02801) (PF00698) (PF00550) (PF16197) (PF14765) (PF08659) (PF00109) | ||||
| 227882.SAV_942 | (PF02801) (PF14765) (PF00550) (PF16197) (PF00698) (PF08659) (PF00109) | ||||
| 227882.SAV_7361 | (PF02801) (PF00698) (PF00109) (PF14765) (PF16197) | ER | |||
| 227882.SAV_7362 | (PF02801) (PF00698) (PF00550) (PF16197) (PF08659) (PF00109) | (ER) | |||
| 227882.SAV_417 | (PF02801) (PF14765) (PF00550) (PF16197) (PF00698) (PF08659) (PF00109) | ||||
| 227882.SAV_415 | (PF02801) (PF00698) (PF00550) (PF16197) (PF00975) (PF08659) (PF00109) | ||||
| 227882.SAV_419 | (PF02801) (PF14765) (PF00550) (PF16197) (PF00698) (PF08659) (PF00109) | ||||
| 227882.SAV_418 | (PF02801) (PF00698) (PF00550) (PF16197) (PF14765) (PF08659) (PF00109) | ||||
| 227882.SAV_938 | (PF02801) (PF00698) (PF00550) (PF16197) (PF14765) (PF08659) (PF00109) | ||||
| 227882.SAV_939 | (PF02801) (PF00698) (PF00550) (PF16197) (PF14765) (PF08659) (PF00109) | ||||
| 227882.SAV_2368 | (PF02801) (PF14765) (PF00550) (PF16197) (PF00698) (PF08659) (PF00109) | ||||
| 227882.SAV_1551 | (PF02801) (PF14765) (PF00550) (PF16197) (PF00698) (PF08659) (PF00109) | ||||
| 227882.SAV_2898 | (PF02801) (PF00698) (PF00550) (PF16197) (PF08659) (PF00109) | ||||
| 227882.SAV_2896 | (PF02801) (PF00698) (PF00550) (PF16197) (PF08659) (PF00109) | ||||
| 227882.SAV_416 | (PF02801) (PF00698) (PF00550) (PF16197) (PF08659) (PF00109) | ||||
| 227882.SAV_7184 | (PF02801) (PF00698) (PF00550) (PF16197) (PF08659) (PF00109) | ||||
| 227882.SAV_845 | (PF02801) (PF00698) (PF00550) (PF00109) (PF16197) | ||||
| 227882.SAV_2014 | (PF12972) (PF12971) (PF05089) | ER | |||
| 227882.SAV_1037 | (PF02868) (PF01447) (PF07504) | mitochondrial; (mitochondrial) | |||
| 227882.SAV_5669 | (PF02868) (PF07504) (PF01447) | (ER); plastid | |||
| 227882.SAV_1128 | (PF02868) (PF01447) (PF07504) | (ER) | |||
| 227882.SAV_2281 | (PF02801) (PF14765) (PF00698) (PF00109) (PF16197) | ||||
| 227882.SAV_2795 | (PF02868) (PF01447) (PF07504) | mitochondrial | |||
| 227882.SAV_2794 | (PF02868) (PF01447) (PF07504) | (mitochondrial) | |||
| 227882.SAV_2108 | (PF14686) (PF09284) (PF14683) | (ER) | |||
| 227882.SAV_5630 | (PF02868) (PF01447) (PF07504) | ER | |||
| 227882.SAV_6770 | (PF08022) (PF01794) | (mitochondrial) | |||
| 227882.SAV_1249 | (PF02801) (PF00109) (PF16197) | (mitochondrial) | |||
| 227882.SAV_5787 | (PF08545) (PF08541) | (mitochondrial) | |||
| 227882.SAV_293 | (PF08022) (PF01794) | ER | |||
| 227882.SAV_2944 | (PF02801) (PF00109) | (ER) | |||
| 227882.SAV_3388 | PF01839 (PF01510) | (mitochondrial) | |||
| 227882.SAV_2838 | (PF02801) (PF00109) | (ER) | |||
| 227882.SAV_1675 | (PF01433) | ER | |||
| 227882.SAV_6248 | (PF13515) | mitochondrial | |||
| 227882.SAV_555 | (PF01670) | ER | |||
| 227882.SAV_967 | (PF16483) | (ER) | |||
| 227882.SAV_1366 | (PF02868) (PF07504) (PF01447) | ||||
| 227882.SAV_5725 | (PF14087) | ER | |||
| 227882.SAV_1117 | (PF01433) | ER | |||
| 227882.SAV_1288 | (PF07335) | (mitochondrial) | |||
| 227882.SAV_924 | (PF07228) | (mitochondrial) | |||
| 227882.SAV_1475 | (PF16499) | (mitochondrial) | |||
| 227882.SAV_5744 | (PF01833) | mitochondrial; (mitochondrial) | |||
| 227882.SAV_1053 | (PF16483) | mitochondrial | |||
| 227882.SAV_7142 | (PF13653) | mitochondrial | |||
| 227882.SAV_4009 | (PF07228) | mitochondrial; (mitochondrial) | |||
| 227882.SAV_7207 | (PF01419) | ER | |||
| 227882.SAV_3789 | PF01839 | ER | |||
| 227882.SAV_2457 | (PF03747) | (ER) | |||
| 227882.SAV_4474 | PF01839 | ER | |||
| 227882.SAV_4475 | PF01839 | ER | |||
| 227882.SAV_4476 | PF01839 | ER | |||
| 227882.SAV_4477 | PF01839 | ER | |||
| 227882.SAV_4473 | PF01839 | ER | |||
| 227882.SAV_4478 | PF01839 | ER | |||
| 227882.SAV_4479 | PF01839 | ER | |||
| 227882.SAV_1567 | (PF12222) | ER | |||
| 227882.SAV_609 | (PF08545) (PF08541) | (ER) | |||
| 227882.SAV_2471 | (PF01433) | (ER) | |||
| 227882.SAV_2112 | (PF03747) | (mitochondrial); (plastid) | |||
| 227882.SAV_3008 | (PF01510) | (mitochondrial) | |||
| 227882.SAV_628 | (PF16499) | ER | |||
| 227882.SAV_100 | (PF02801) (PF00109) (PF16197) | ||||
| 227882.SAV_7579 | (PF13515) | mitochondrial | |||
| 227882.SAV_786 | (PF07228) | mitochondrial | |||
| 227882.SAV_1077 | (PF16499) | (mitochondrial); plastid | |||
| 227882.SAV_5988 | (PF12972) (PF12971) (PF05089) | ||||
| 227882.SAV_4160 | (PF12006) | mitochondrial | |||
| 227882.SAV_2571 | (PF01670) | mitochondrial; (mitochondrial) | |||
| 227882.SAV_5217 | (PF01341) | ER | |||
| 227882.SAV_4108 | (PF07228) | (mitochondrial) | |||
| 227882.SAV_1850 | (PF07335) | ER | |||
| 227882.SAV_1853 | (PF01341) | ER | |||
| 227882.SAV_1149 | PF01839 | ER | |||
| 227882.SAV_1142 | (PF07228) | mitochondrial | |||
| 227882.SAV_2764 | (PF01433) | mitochondrial | |||
| 227882.SAV_3159 | (PF00550) | mitochondrial | |||
| 227882.SAV_2922 | PF01839 | ER | |||
| 227882.SAV_6744 | (PF07228) | mitochondrial; (mitochondrial) | |||
| 227882.SAV_3197 | (PF00975) (PF00550) | (mitochondrial) | |||
| 227882.SAV_7166 | (PF01510) | mitochondrial | |||
| 227882.SAV_930 | (PF01510) | (mitochondrial); (plastid) | |||
| 227882.SAV_1353 | (PF16483) | (mitochondrial); plastid | |||
| 227882.SAV_6029 | (PF09924) | (mitochondrial); (plastid) | |||
| 227882.SAV_6514 | (PF03747) | (ER) | |||
| 227882.SAV_203 | (PF14087) | ER | |||
| 227882.SAV_6185 | (PF03747) | ER | |||
| 227882.SAV_5756 | (PF10435) (PF13363) | (plastid) | |||
| 227882.SAV_2188 | (PF08376) | ER | |||
| 227882.SAV_2186 | (PF16499) | mitochondrial | |||
| 227882.SAV_223 | (PF03457) | (mitochondrial) | |||
| 227882.SAV_6896 | (PF01341) | (ER); (plastid) | |||
| 227882.SAV_7276 | (PF03644) | (ER) | |||
| 227882.SAV_3952 | (PF01433) | ER | |||
| 227882.SAV_368 | (PF04434) | (mitochondrial) | |||
| 227882.SAV_360 | (PF12138) | ER | |||
| 227882.SAV_5287 | PF01839 | ER | |||
| 227882.SAV_1498 | (PF13515) | (ER) | |||
| 227882.SAV_6958 | (PF08376) | ER | |||
| 227882.SAV_4153 | (PF01510) | mitochondrial | |||
| 227882.SAV_4151 | (PF07228) | ER | |||
| 227882.SAV_7174 | (PF09346) | mitochondrial; (mitochondrial) | |||
| 227882.SAV_7179 | (PF01510) | (mitochondrial) | |||
| 227882.SAV_3878 | (PF03259) | (ER) | |||
| 227882.SAV_7489 | (PF00781) | (mitochondrial) | |||
| 227882.SAV_5411 | (PF11838) (PF01433) | ||||
| 227882.SAV_5036 | (PF01510) | (ER) | |||
| 227882.SAV_840 | (PF00975) | (mitochondrial) | |||
| 227882.SAV_734 | (PF14684) | (mitochondrial) | |||
| 227882.SAV_557 | (PF01341) | (mitochondrial) | |||
| 227882.SAV_7321 | (PF04183) (PF06276) | ||||
| 227882.SAV_7322 | (PF04183) (PF06276) | ||||
| 227882.SAV_2276 | (PF08545) (PF08541) | ||||
| 227882.SAV_5269 | (PF04183) (PF06276) | ||||
| 227882.SAV_255 | (PF01433) | plastid | |||
| 227882.SAV_2004 | (PF04183) (PF06276) | ||||
| 227882.SAV_2292 | (PF02801) (PF00109) | ||||
| 227882.SAV_2290 | (PF08545) (PF08541) | ||||
| 227882.SAV_2194 | (PF08022) (PF01794) | ||||
| 227882.SAV_2375 | (PF02801) (PF00109) | ||||
| 227882.SAV_2374 | (PF08545) (PF08541) | ||||
| 227882.SAV_2376 | (PF02801) (PF00109) | ||||
| 227882.SAV_3769 | (PF11838) (PF01433) | ||||
| 227882.SAV_3015 | (PF00781) | (mitochondrial) | |||
| 227882.SAV_5785 | (PF02801) (PF00109) | ||||
| 227882.SAV_3201 | (PF00975) | (mitochondrial) | |||
| 227882.SAV_5600 | (PF02868) (PF01447) | ||||
| 227882.SAV_2280 | (PF00550) (PF08659) | ||||
| 227882.SAV_3660 | (PF02801) (PF00109) | ||||
| 227882.SAV_3664 | (PF02801) (PF00109) | ||||
| 227882.SAV_3665 | (PF02801) (PF00109) | ||||
| 227882.SAV_1252 | (PF08376) | (ER) | |||
| 227882.SAV_5395 | (PF11838) (PF01433) | ||||
| 227882.SAV_1093 | (PF07228) | (mitochondrial) | |||
| 227882.SAV_1098 | (PF07228) | (plastid) | |||
| 227882.SAV_5406 | (PF01833) | plastid | |||
| 227882.SAV_2961 | (PF03259) | (plastid) | |||
| 227882.SAV_1859 | (PF03747) | (mitochondrial) | |||
| 227882.SAV_3521 | (PF08545) (PF08541) | ||||
| 227882.SAV_1831 | (PF08545) (PF08541) | ||||
| 227882.SAV_1374 | (PF08545) (PF08541) | ||||
| 227882.SAV_4953 | (PF01000) (PF01193) | ||||
| 227882.SAV_6212 | (PF11838) (PF01433) | ||||
| 227882.SAV_2003 | (PF04183) (PF06276) | ||||
| 227882.SAV_440 | (PF01000) (PF01193) | ||||
| 227882.SAV_2182 | (PF03029) | (ER) | |||
| 227882.SAV_3797 | (PF12006) | (plastid) | |||
| 227882.SAV_3639 | (PF00975) | (mitochondrial) | |||
| 227882.SAV_35 | (PF09346) | plastid | |||
| 227882.SAV_2466 | (PF04183) (PF06276) | ||||
| 227882.SAV_827 | (PF08545) (PF08541) | ||||
| 227882.SAV_865 | (PF00975) (PF00550) | ||||
| 227882.SAV_3659 | (PF00109) | (mitochondrial) | |||
| 227882.SAV_2839 | (PF02801) (PF00109) | ||||
| 227882.SAV_848 | (PF00550) | ||||
| 227882.SAV_846 | (PF00550) | ||||
| 227882.SAV_847 | (PF00550) | ||||
| 227882.SAV_1086 | (PF07228) | ||||
| 227882.SAV_1084 | (PF09348) | ||||
| 227882.SAV_1885 | (PF03364) | ||||
| 227882.SAV_7131 | (PF08392) | ||||
| 227882.SAV_2568 | (PF01670) | ||||
| 227882.SAV_756 | (PF06241) | ||||
| 227882.SAV_843 | (PF00975) | ||||
| 227882.SAV_2959 | (PF03029) | ||||
| 227882.SAV_3642 | (PF00550) | ||||
| 227882.SAV_5203 | (PF13391) | ||||
| 227882.SAV_5015 | (PF00781) | ||||
| 227882.SAV_3557 | (PF09346) | ||||
| 227882.SAV_4673 | (PF09924) | ||||
| 227882.SAV_7324 | (PF07228) | ||||
| 227882.SAV_1581 | (PF03259) | ||||
| 227882.SAV_3185 | (PF07228) | ||||
| 227882.SAV_590 | (PF14437) | ||||
| 227882.SAV_2274 | (PF00781) | ||||
| 227882.SAV_2277 | (PF00975) | ||||
| 227882.SAV_4330 | (PF00643) | ||||
| 227882.SAV_407 | (PF00975) | ||||
| 227882.SAV_6772 | (PF01794) | ||||
| 227882.SAV_7288 | (PF07228) | ||||
| 227882.SAV_1391 | (PF07228) | ||||
| 227882.SAV_1137 | (PF00264) | ||||
| 227882.SAV_7360 | (PF00550) | ||||
| 227882.SAV_922 | (PF07228) | ||||
| 227882.SAV_6016 | (PF01510) | ||||
| 227882.SAV_3723 | (PF13391) | ||||
| 227882.SAV_1015 | (PF12138) | ||||
| 227882.SAV_279 | PF02945 | ||||
| 227882.SAV_7252 | (PF06276) | ||||
| 227882.SAV_3928 | (PF07228) | ||||
| 227882.SAV_5565 | (PF07228) | ||||
| 227882.SAV_3746 | (PF13391) | ||||
| 227882.SAV_2294 | (PF02403) | ||||
| 227882.SAV_2291 | (PF00550) | ||||
| 227882.SAV_1714 | (PF03803) | ||||
| 227882.SAV_2998 | (PF03936) | ||||
| 227882.SAV_2191 | (PF03029) | ||||
| 227882.SAV_217 | (PF00550) | ||||
| 227882.SAV_2373 | (PF00550) | ||||
| 227882.SAV_6694 | (PF00781) | ||||
| 227882.SAV_1054 | (PF07228) | ||||
| 227882.SAV_6889 | (PF08376) | ||||
| 227882.SAV_7228 | (PF13515) | ||||
| 227882.SAV_3762 | (PF09346) | ||||
| 227882.SAV_3223 | (PF07228) | ||||
| 227882.SAV_3593 | (PF14437) | ||||
| 227882.SAV_457 | (PF04434) | ||||
| 227882.SAV_238 | (PF07228) | ||||
| 227882.SAV_3788 | (PF03747) | ||||
| 227882.SAV_5786 | (PF00550) | ||||
| 227882.SAV_5788 | (PF00698) | ||||
| 227882.SAV_3202 | (PF00975) | ||||
| 227882.SAV_437 | (PF07228) | ||||
| 227882.SAV_2841 | (PF03364) | ||||
| 227882.SAV_2840 | (PF00550) | ||||
| 227882.SAV_28 | (PF03457) | ||||
| 227882.SAV_7533 | (PF07931) | ||||
| 227882.SAV_6680 | PF02945 | ||||
| 227882.SAV_3880 | (PF03029) | ||||
| 227882.SAV_410 | (PF07721) | ||||
| 227882.SAV_3620 | (PF14684) | ||||
| 227882.SAV_2697 | (PF03029) | ||||
| 227882.SAV_2694 | (PF08376) | ||||
| 227882.SAV_2695 | (PF03259) | ||||
| 227882.SAV_604 | (PF00550) | ||||
| 227882.SAV_603 | (PF00550) | ||||
| 227882.SAV_350 | (PF07228) | ||||
| 227882.SAV_608 | (PF00550) | ||||
| 227882.SAV_4459 | (PF01186) | ||||
| 227882.SAV_1977 | (PF04434) | ||||
| 227882.SAV_4180 | (PF14437) | ||||
| 227882.SAV_6962 | (PF03029) | ||||
| 227882.SAV_3083 | (PF12138) | ||||
| 227882.SAV_839 | (PF00550) | ||||
| 227882.SAV_2286 | (PF03364) | ||||
| 227882.SAV_3458 | (PF04434) | ||||
| 227882.SAV_2351 | (PF03364) | ||||
| 227882.SAV_7165 | (PF00550) | ||||
| 227882.SAV_101 | (PF00698) | ||||
| 227882.SAV_3663 | (PF00109) | ||||
| 227882.SAV_3666 | (PF00550) | ||||
| 227882.SAV_7571 | (PF03457) | ||||
| 227882.SAV_2701 | (PF03029) | ||||
| 227882.SAV_1255 | (PF03029) | ||||
| 227882.SAV_1253 | (PF03259) | ||||
| 227882.SAV_787 | (PF07931) | ||||
| 227882.SAV_871 | (PF00550) | ||||
| 227882.SAV_877 | (PF07931) | ||||
| 227882.SAV_3649 | (PF00550) | ||||
| 227882.SAV_2513 | (PF07228) | ||||
| 227882.SAV_1097 | (PF07228) | ||||
| 227882.SAV_2754 | (PF01510) | ||||
| 227882.SAV_5983 | (PF07228) | ||||
| 227882.SAV_1334 | (PF07228) | ||||
| 227882.SAV_852 | (PF00550) | ||||
| 227882.SAV_856 | (PF00975) | ||||
| 227882.SAV_855 | (PF00550) | ||||
| 227882.SAV_1152 | (PF00781) | ||||
| 227882.SAV_1879 | (PF00781) | ||||
| 227882.SAV_2962 | (PF08376) | ||||
| 227882.SAV_3 | PF02945 | ||||
| 227882.SAV_6 | (PF03457) | ||||
| 227882.SAV_3156 | (PF00550) | ||||
| 227882.SAV_956 | (PF07228) | ||||
| 227882.SAV_953 | (PF00975) | ||||
| 227882.SAV_112 | (PF07228) | ||||
| 227882.SAV_7478 | (PF07228) | ||||
| 227882.SAV_3158 | (PF00975) | ||||
| 227882.SAV_2923 | PF01839 | ||||
| 227882.SAV_568 | (PF07228) | ||||
| 227882.SAV_7330 | (PF07228) | ||||
| 227882.SAV_2903 | (PF00975) | ||||
| 227882.SAV_4415 | (PF07228) | ||||
| 227882.SAV_1919 | (PF03747) | ||||
| 227882.SAV_6818 | (PF03364) | ||||
| 227882.SAV_767 | (PF07228) | ||||
| 227882.SAV_7296 | (PF09924) | ||||
| 227882.SAV_587 | (PF07228) | ||||
| 227882.SAV_586 | (PF07228) | ||||
| 227882.SAV_3198 | (PF00550) | ||||
| 227882.SAV_3199 | (PF00550) | ||||
| 227882.SAV_7356 | (PF00264) | ||||
| 227882.SAV_3292 | (PF07250) | ||||
| 227882.SAV_4893 | (PF09346) | ||||
| 227882.SAV_7012 | (PF07721) | ||||
| 227882.SAV_5712 | (PF07721) | ||||
| 227882.SAV_4394 | (PF07228) | ||||
| 227882.SAV_5362 | (PF00264) | ||||
| 227882.SAV_6703 | (PF03259) | ||||
| 227882.SAV_6705 | (PF03029) | ||||
| 227882.SAV_2282 | (PF00550) | ||||
| 227882.SAV_5083 | (PF03747) | ||||
| 227882.SAV_91 | (PF13391) | ||||
| 227882.SAV_698 | (PF07228) | ||||
| 227882.SAV_6187 | (PF03747) | ||||
| 227882.SAV_6184 | (PF03747) | ||||
| 227882.SAV_6183 | (PF03747) | ||||
| 227882.SAV_5574 | (PF14684) | ||||
| 227882.SAV_3752 | PF01839 | ||||
| 227882.SAV_4244 | (PF02403) | ||||
| 227882.SAV_2189 | (PF03259) | ||||
| 227882.SAV_2180 | (PF03259) | ||||
| 227882.SAV_1516 | (PF13515) | ||||
| 227882.SAV_71 | (PF03364) | ||||
| 227882.SAV_6890 | (PF03259) | ||||
| 227882.SAV_7078 | (PF14216) | ||||
| 227882.SAV_2796 | (PF09348) | ||||
| 227882.SAV_428 | (PF03364) | ||||
| 227882.SAV_2300 | (PF09924) | ||||
| 227882.SAV_58 | (PF01833) | ||||
| 227882.SAV_57 | (PF01833) | ||||
| 227882.SAV_50 | (PF13515) | ||||
| 227882.SAV_1235 | (PF07228) | ||||
| 227882.SAV_1238 | (PF01510) | ||||
| 227882.SAV_1582 | (PF08376) | ||||
| 227882.SAV_1550 | (PF00550) | ||||
| 227882.SAV_1554 | (PF07228) | ||||
| 227882.SAV_4229 | (PF07228) | ||||
| 227882.SAV_3500 | (PF03259) | ||||
| 227882.SAV_2698 | (PF08376) | ||||
| 227882.SAV_2699 | (PF03259) | ||||
| 227882.SAV_7498 | (PF07228) | ||||
| 227882.SAV_5613 | (PF00102) | ||||
| 227882.SAV_13 | (PF03457) | ||||
| 227882.SAV_1577 | (PF03259) | ||||
| 227882.SAV_1579 | (PF03029) | ||||
| 227882.SAV_7504 | (PF07228) | ||||
| 227882.SAV_1902 | (PF07228) | ||||
| 227882.SAV_6959 | (PF03259) | ||||
| 227882.SAV_1630 | (PF03029) | ||||
| 227882.SAV_1632 | (PF03259) | ||||
| 227882.SAV_5429 | (PF07228) | ||||
| 227882.SAV_3643 | (PF00550) | ||||
| 227882.SAV_808 | (PF07228) | ||||
| 227882.SAV_321 | (PF07228) | ||||
| 227882.SAV_4152 | (PF01433) | ||||
| 227882.SAV_4408 | (PF13515) | ||||
| 227882.SAV_7172 | (PF07228) | ||||
| 227882.SAV_864 | (PF00550) | ||||
| 227882.SAV_869 | (PF00550) | ||||
| 227882.SAV_3657 | (PF00109) | ||||
| 227882.SAV_3656 | (PF00550) | ||||
| 227882.SAV_6632 | (PF01433) | ||||
| 227882.SAV_6633 | (PF00550) |
Detailed merged results for each protein sequence
- Detailed merged results as table (merge_results.html)
- Detailed merged results as tab delimited file (merge_results.csv)
Individual results for each protein sequence
- EffectiveELD predictions (PROTEINS.ELD.TXT)
- Predotar predictions using animal/human model (Predotar_output_modelANIMAL.TXT)
- Predotar predictions using plant model (Predotar_output_modelPLANT.TXT)
Genome based results
Summary
- Gram negative: NO (FDR = 0.5 %)
- Functional Type III secretion system: N.D.
- Functional Type IV secretion system: NO (FDR = 7.2 %)
- Functional Type VI secretion system: N.D.
Individual results for each secretion system
Parameters:
==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================
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