Effective results for Nitrospira defluvii (eggnog40)
Summary
Number of putative secreted proteins: 99
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 40 eukaryotic-like domains, contained in 99 proteins (12 high, 87 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None
Protein based results
Putative secreted proteins (weak evidence indicated by parentheses)
Protein | EffectiveT3 | EffectiveCCBD | T4SEpre | EffectiveELD | Predotar |
---|---|---|---|---|---|
330214.NIDE2386 | (PF16889) | (mitochondrial) | |||
330214.NIDE1527 | (PF00839) | ER | |||
330214.NIDE2399 | (PF16889) | (mitochondrial) | |||
330214.NIDE1609 | (PF16561) | ER | |||
330214.NIDE4178 | (PF03781) | ER | |||
330214.NIDE4175 | (PF03781) | ER | |||
330214.NIDE1115 | (PF03781) | ER | |||
330214.NIDE0256 | (PF13646) | mitochondrial; (mitochondrial) | |||
330214.NIDE3299 | (PF03781) | ER | |||
330214.NIDE0889 | (PF10531) | mitochondrial; (mitochondrial) | |||
330214.NIDE3373 | (PF03781) | ER | |||
330214.NIDE3368 | (PF02577) | ER | |||
330214.NIDE0058 | (PF03092) | (mitochondrial) | |||
330214.NIDE0263 | (PF13646) | ER | |||
330214.NIDE2682 | (PF10531) | ER | |||
330214.NIDE2680 | (PF10531) | ER | |||
330214.NIDE2681 | (PF10531) | ER | |||
330214.NIDE0199 | (PF13664) | ER | |||
330214.NIDE3796 | (PF16864) | (ER) | |||
330214.NIDE0192 | (PF03781) | (ER) | |||
330214.NIDE0193 | (PF03781) | ER | |||
330214.NIDE0195 | (PF03781) | ER | |||
330214.NIDE3429 | (PF05711) | mitochondrial | |||
330214.NIDE0524 | (PF13646) | ER | |||
330214.NIDE3300 | (PF03781) | ER | |||
330214.NIDE1498 | (PF00839) | ER | |||
330214.NIDE3935 | (PF03781) | ER | |||
330214.NIDE3934 | (PF03781) | mitochondrial | |||
330214.NIDE3451 | (PF03781) | ER | |||
330214.NIDE2899 | (PF10531) | ER | |||
330214.NIDE2898 | (PF10531) | (ER); ER | |||
330214.NIDE1761 | (PF13436) | ER | |||
330214.NIDE2406 | (PF10531) | ER | |||
330214.NIDE2541 | (PF13664) | ER | |||
330214.NIDE1190 | (PF03781) | ER | |||
330214.NIDE3695 | PF03366 | ER | |||
330214.NIDE3271 | PF09459 | ER | |||
330214.NIDE3278 | PF09459 | ER | |||
330214.NIDE4059 | PF06884 | ER | |||
330214.NIDE4058 | PF06884 | ER | |||
330214.NIDE4267 | PF14686 | ER | |||
330214.NIDE3482 | (PF02012) | (mitochondrial) | |||
330214.NIDE0604 | (PF06455) | ER | |||
330214.NIDE0904 | PF09459 | ER | |||
330214.NIDE0297 | (PF00227) | (mitochondrial) | |||
330214.NIDE3812 | (PF12895) | ER | |||
330214.NIDE1860 | (PF03781) | ER | |||
330214.NIDE1096 | (PF12895) | ER | |||
330214.NIDE4164 | (PF07837) (PF02971) | ||||
330214.NIDE1288 | (PF13646) | (plastid) | |||
330214.NIDE1286 | (PF03130) (PF13646) | ||||
330214.NIDE2002 | (PF13646) | (ER) | |||
330214.NIDE1931 | (PF10531) | (plastid) | |||
330214.NIDE1740 | (PF11074) | (mitochondrial) | |||
330214.NIDE4147 | (PF03130) (PF13646) | ||||
330214.NIDE4149 | (PF03130) (PF13646) | ||||
330214.NIDE3009 | (PF16889) | plastid | |||
330214.NIDE4150 | (PF03130) (PF13646) | ||||
330214.NIDE0749 | (PF02012) | ||||
330214.NIDE1061 | (PF07720) | ||||
330214.NIDE3342 | (PF10609) | ||||
330214.NIDE2481 | (PF10609) | ||||
330214.NIDE4379 | (PF13883) | ||||
330214.NIDE1608 | (PF16561) | ||||
330214.NIDE0412 | (PF10609) | ||||
330214.NIDE3979 | (PF16864) | ||||
330214.NIDE3560 | (PF10531) | ||||
330214.NIDE3565 | (PF02943) | ||||
330214.NIDE4035 | (PF03781) | ||||
330214.NIDE3177 | (PF02732) | ||||
330214.NIDE3428 | (PF05711) | ||||
330214.NIDE3224 | (PF12895) | ||||
330214.NIDE2751 | (PF02577) | ||||
330214.NIDE2752 | (PF02577) | ||||
330214.NIDE0528 | (PF04455) | ||||
330214.NIDE3309 | (PF13646) | ||||
330214.NIDE3334 | (PF13661) | ||||
330214.NIDE2791 | (PF16864) | ||||
330214.NIDE3206 | PF12142 | ||||
330214.NIDE0784 | PF01231 | ||||
330214.NIDE0834 | (PF16114) | ||||
330214.NIDE3936 | PF14686 | ||||
330214.NIDE3329 | (PF03031) | ||||
330214.NIDE2940 | (PF09471) | ||||
330214.NIDE0958 | (PF00227) | ||||
330214.NIDE0959 | (PF00227) | ||||
330214.NIDE2955 | (PF09471) | ||||
330214.NIDE0179 | (PF02945) | ||||
330214.NIDE1198 | (PF13646) | ||||
330214.NIDE3055 | (PF00227) | ||||
330214.NIDE3056 | (PF00227) | ||||
330214.NIDE3307 | (PF16864) | ||||
330214.NIDE0611 | (PF10531) | ||||
330214.NIDE0972 | (PF08263) | ||||
330214.NIDE2073 | PF09239 | ||||
330214.NIDE2074 | PF04406 | ||||
330214.NIDE4146 | (PF13646) | ||||
330214.NIDE4148 | (PF13646) | ||||
330214.NIDE2061 | (PF13883) |
Detailed merged results for each protein sequence
- Detailed merged results as table (merge_results.html)
- Detailed merged results as tab delimited file (merge_results.csv)
Individual results for each protein sequence
- EffectiveELD predictions (PROTEINS.ELD.TXT)
- Predotar predictions using animal/human model (Predotar_output_modelANIMAL.TXT)
- Predotar predictions using plant model (Predotar_output_modelPLANT.TXT)