Metamenu

Effective results for Fusobacterium nucleatum subsp. animalis 7_1 (eggnog40)

Summary

Number of putative secreted proteins: 40
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 12 eukaryotic-like domains, contained in 40 proteins (18 high, 22 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
457405.FSDG_01310PF09820mitochondrial; (mitochondrial)
457405.FSDG_01925(PF09511)mitochondrial
457405.FSDG_00297PF09820 PF08011
457405.FSDG_01991PF09820 PF08011
457405.FSDG_00338(PF02971) (PF07837)
457405.FSDG_02267PF09820 PF08011
457405.FSDG_01315PF09820 PF08011
457405.FSDG_01332PF09820 PF08011
457405.FSDG_02246PF09820 PF08011not used
457405.FSDG_01837PF09820 PF08011
457405.FSDG_00063PF09820 PF08011
457405.FSDG_01900PF09820 PF08011
457405.FSDG_02178PF09820 PF08011
457405.FSDG_00723PF09820 PF08011
457405.FSDG_01544PF09820 PF08011
457405.FSDG_00590PF09820 PF08011
457405.FSDG_00910PF09820 PF08011
457405.FSDG_01969(PF04326)
457405.FSDG_01743(PF04326)
457405.FSDG_01349(PF03797)
457405.FSDG_00909(PF03797)
457405.FSDG_00622(PF03797)
457405.FSDG_02404PF09820
457405.FSDG_02414(PF03797)not used
457405.FSDG_02094(PF03797)
457405.FSDG_00316(PF06414)
457405.FSDG_02331(PF01991)
457405.FSDG_01308(PF03797)
457405.FSDG_01485(PF06414)
457405.FSDG_00044(PF06414)
457405.FSDG_01138(PF03059)
457405.FSDG_01920(PF04326)
457405.FSDG_01631(PF03797)
457405.FSDG_01630PF09820
457405.FSDG_00225(PF06176)
457405.FSDG_00507(PF04326)
457405.FSDG_01420(PF03797)not used
457405.FSDG_01771(PF03797)
457405.FSDG_00178(PF03797)not used
457405.FSDG_02280PF02987

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: NO (FDR = 0.5 %)
  • Functional Type III secretion system: N.D.
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: N.D.

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================