Metamenu

Effective results for Acidaminococcus intestini RyC-MR95 (eggnog40)

Summary

Number of putative secreted proteins: 79
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 17 eukaryotic-like domains, contained in 79 proteins (34 high, 45 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
568816.Acin_2422PF05049mitochondrial
568816.Acin_1272PF01610(mitochondrial); mitochondrial
568816.Acin_0904(PF02436)(mitochondrial); mitochondrial
568816.Acin_2254(PF14566)ER
568816.Acin_1878(PF00476)(ER)
568816.Acin_0279(PF07837) (PF02971)
568816.Acin_0057(PF17147) (PF10371)
568816.Acin_1925(PF12224)(mitochondrial)
568816.Acin_2032(PF17147) (PF10371)
568816.Acin_0174(PF02436)(mitochondrial)
568816.Acin_1089(PF17147) (PF10371)
568816.Acin_2290(PF17147) (PF10371)
568816.Acin_2124(PF09861)
568816.Acin_0043PF01610not used
568816.Acin_2421PF05049
568816.Acin_2204PF01610
568816.Acin_2118(PF09861)
568816.Acin_1010PF01610
568816.Acin_1476(PF02873)
568816.Acin_0453PF01610
568816.Acin_0455PF01610
568816.Acin_1640PF01610
568816.Acin_0848(PF02229)
568816.Acin_0993(PF13276)
568816.Acin_2354PF01610
568816.Acin_1672PF01610
568816.Acin_0508(PF09861)
568816.Acin_0183(PF01991)
568816.Acin_2160PF01610
568816.Acin_1067PF01610
568816.Acin_1288(PF02873)
568816.Acin_1844(PF08774)
568816.Acin_0533PF01610
568816.Acin_1934(PF08774)
568816.Acin_0803PF01610
568816.Acin_2390(PF13276)
568816.Acin_0850(PF03652)
568816.Acin_2363(PF13276)
568816.Acin_2385(PF13276)
568816.Acin_2143(PF13276)
568816.Acin_1602PF01610
568816.Acin_1424(PF13276)
568816.Acin_0952PF01610
568816.Acin_0954PF01610
568816.Acin_0771PF01610
568816.Acin_0943(PF02436)
568816.Acin_1568(PF17147)
568816.Acin_1083PF01610
568816.Acin_1082PF01610
568816.Acin_1086(PF02436)
568816.Acin_0976PF01610
568816.Acin_0975PF01610
568816.Acin_1578(PF13276)
568816.Acin_0621(PF17147)
568816.Acin_1762PF01610
568816.Acin_0967PF01610
568816.Acin_1361(PF00476)
568816.Acin_1503PF01610
568816.Acin_0299PF01610
568816.Acin_1982(PF12224)
568816.Acin_0637(PF02229)
568816.Acin_2073PF01610
568816.Acin_1196(PF03652)
568816.Acin_1519PF01610
568816.Acin_1511(PF13276)
568816.Acin_1992(PF08774)
568816.Acin_1997(PF00476)
568816.Acin_1349(PF12224)
568816.Acin_0344(PF13276)
568816.Acin_0012(PF13276)
568816.Acin_2091(PF00476)
568816.Acin_1356(PF08774)
568816.Acin_0241(PF13276)
568816.Acin_0796PF01610
568816.Acin_0063PF01610
568816.Acin_0482PF01610
568816.Acin_0483PF01610
568816.Acin_0256(PF13276)
568816.Acin_0074PF01610

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: NO (FDR = 0.5 %)
  • Functional Type III secretion system: N.D.
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: N.D.

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================