Metamenu

Effective results for Paenibacillus sp. oral taxon 786 str. D14 (eggnog40)

Summary

Number of putative secreted proteins: 146
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 35 eukaryotic-like domains, contained in 146 proteins (2 high, 144 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
621372.POTG_01979(PF16334) (PF16335) (PF17168) (PF08760)(ER)
621372.POTG_02966(PF01547)ER
621372.POTG_01069(PF01547)ER
621372.POTG_01117(PF01547)ER
621372.POTG_01114(PF01547)ER
621372.POTG_02171(PF01547)ER
621372.POTG_01585(PF01547)ER
621372.POTG_01587(PF00395)ER
621372.POTG_00153(PF00395)ER
621372.POTG_04228(PF03636) (PF03633) (PF03632)
621372.POTG_04227(PF03636) (PF03633) (PF03632)
621372.POTG_01043(PF00395)ER
621372.POTG_01131(PF01547)ER
621372.POTG_03656(PF00395)ER
621372.POTG_03715(PF01547)ER
621372.POTG_02716(PF01547)ER
621372.POTG_03002(PF00395)ER
621372.POTG_01091PF05712(mitochondrial)
621372.POTG_03540(PF06925)(mitochondrial)
621372.POTG_03033(PF01547)ER
621372.POTG_01845(PF01547)ER
621372.POTG_01933(PF01547)ER
621372.POTG_01157(PF01547)ER
621372.POTG_00608(PF00395)ER
621372.POTG_02735(PF01547)(ER); (mitochondrial)
621372.POTG_03806(PF01547)ER
621372.POTG_03734(PF01547)ER
621372.POTG_02608(PF00395)(mitochondrial)
621372.POTG_02195(PF01547)ER
621372.POTG_02190(PF01547)ER
621372.POTG_01892(PF00395)ER
621372.POTG_01946(PF01547)ER
621372.POTG_01097(PF03636) (PF03633) (PF03632)
621372.POTG_01093(PF01547)ER
621372.POTG_04061(PF01547)ER
621372.POTG_03835(PF01547)ER; (ER)
621372.POTG_01080(PF04012)(mitochondrial)
621372.POTG_01907(PF00395)ER
621372.POTG_01415(PF01547)ER
621372.POTG_03332(PF01547)ER
621372.POTG_00107(PF01547)ER
621372.POTG_03671(PF01547)ER
621372.POTG_04135(PF01547)mitochondrial
621372.POTG_04139(PF03636) (PF03633) (PF03632)
621372.POTG_01409(PF00395)ER
621372.POTG_01199(PF16158)mitochondrial; (mitochondrial)
621372.POTG_03209(PF00395)mitochondrial; (mitochondrial)
621372.POTG_02339(PF01547)(ER)
621372.POTG_01212(PF03636) (PF03633) (PF03632)
621372.POTG_02924(PF01547)ER
621372.POTG_02928(PF00395)mitochondrial; ER
621372.POTG_03840(PF01547)(ER)
621372.POTG_00514(PF01547)ER
621372.POTG_03314(PF01547)ER
621372.POTG_02681(PF00395)(ER)
621372.POTG_03668(PF01547)ER
621372.POTG_02919(PF00395)ER
621372.POTG_00675(PF00395)ER
621372.POTG_03258(PF01547)ER
621372.POTG_03520(PF01547)ER
621372.POTG_02344(PF00395)ER
621372.POTG_03751(PF01547)ER
621372.POTG_02752(PF01547)(mitochondrial); mitochondrial
621372.POTG_01497(PF01547)ER
621372.POTG_02801(PF00395)ER
621372.POTG_02741(PF00395)ER
621372.POTG_01045(PF00395)(plastid)
621372.POTG_01134(PF16875) (PF16874)
621372.POTG_01709(PF09359)(mitochondrial)
621372.POTG_00600(PF07488) (PF07477)
621372.POTG_00777(PF17167) (PF06165)
621372.POTG_01559(PF00395)plastid
621372.POTG_03231(PF04012)(mitochondrial)
621372.POTG_01965(PF16875) (PF16874)
621372.POTG_03008(PF01547)(ER)
621372.POTG_00516(PF07488) (PF07477)
621372.POTG_03316(PF17167) (PF06165)
621372.POTG_00214(PF06165) (PF17167)
621372.POTG_00210(PF16875) (PF16874)
621372.POTG_04301(PF06165) (PF17167)
621372.POTG_00531(PF02873)(mitochondrial)
621372.POTG_02967(PF00703)
621372.POTG_02773(PF00703)
621372.POTG_01909(PF05448)
621372.POTG_00094(PF17125)
621372.POTG_03014(PF01547)
621372.POTG_01608(PF05448)
621372.POTG_01606(PF00703)
621372.POTG_00392(PF00395)
621372.POTG_02783(PF00154)
621372.POTG_02719(PF00703)
621372.POTG_03398(PF06925)
621372.POTG_03001(PF04041)
621372.POTG_03004(PF00703)
621372.POTG_03005(PF04041)
621372.POTG_02534(PF17125)
621372.POTG_00087(PF17125)
621372.POTG_00146(PF01547)
621372.POTG_00362(PF00154)
621372.POTG_01624(PF03663)
621372.POTG_01622(PF06824)
621372.POTG_01623(PF03663)
621372.POTG_01158(PF00703)
621372.POTG_00601(PF00703)
621372.POTG_02734(PF01547)
621372.POTG_03802(PF08950)
621372.POTG_03803(PF04041)
621372.POTG_03730(PF12740)
621372.POTG_01895(PF00703)
621372.POTG_04289(PF09261)
621372.POTG_02984(PF00395)not used
621372.POTG_01885(PF00395)not used
621372.POTG_04074(PF02403)
621372.POTG_01419(PF04041)
621372.POTG_01412(PF04041)
621372.POTG_01411(PF05448)
621372.POTG_02885(PF02873)
621372.POTG_01183(PF09261)
621372.POTG_01185(PF04041)
621372.POTG_01184(PF06824)
621372.POTG_01186(PF09261)
621372.POTG_03691(PF00154)not used
621372.POTG_00811(PF00395)
621372.POTG_03672(PF00395)
621372.POTG_03677(PF00395)not used
621372.POTG_03676(PF01547)
621372.POTG_01977(PF09261)
621372.POTG_01997(PF04012)
621372.POTG_01995(PF04012)
621372.POTG_00795(PF02403)
621372.POTG_00783(PF09359)
621372.POTG_00275PF02150
621372.POTG_03785(PF00703)
621372.POTG_03781(PF10435)
621372.POTG_01335(PF06925)
621372.POTG_00840(PF06925)
621372.POTG_01235(PF04012)
621372.POTG_01302(PF00703)
621372.POTG_01652(PF00477)
621372.POTG_01530(PF04041)
621372.POTG_02755(PF00703)
621372.POTG_02756(PF00703)
621372.POTG_02211(PF12740)
621372.POTG_02979(PF01547)
621372.POTG_02974(PF00703)
621372.POTG_02748(PF00703)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: NO (FDR = 0.5 %)
  • Functional Type III secretion system: N.D.
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: N.D.

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================