Effective results for Solirubrobacterales bacterium URHD0059 (refseq)
Summary
Number of putative secreted proteins: 362
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 45 eukaryotic-like domains, contained in 362 proteins (6 high, 356 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None
Protein based results
Putative secreted proteins (weak evidence indicated by parentheses)
| Protein | EffectiveT3 | EffectiveCCBD | T4SEpre | EffectiveELD | Predotar |
|---|---|---|---|---|---|
| WP_028076534.1 | (PF13692) (PF13579) | mitochondrial | |||
| WP_028076689.1 | (PF13692) (PF13579) | ER; (ER) | |||
| WP_052179766.1 | (PF02128) | ER | |||
| WP_028074781.1 | (PF01872) | (ER) | |||
| WP_028073665.1 | (PF04107) | mitochondrial | |||
| WP_028075667.1 | (PF09851) | mitochondrial | |||
| WP_052178811.1 | (PF02129) | ER | |||
| WP_037400745.1 | (PF06772) | ER; (ER) | |||
| WP_028076598.1 | (PF00127) | ER | |||
| WP_052179570.1 | (PF13191) | (mitochondrial) | |||
| WP_028075579.1 | (PF16158) | mitochondrial; (mitochondrial) | |||
| WP_052178760.1 | (PF12850) | (mitochondrial) | |||
| WP_028076599.1 | (PF13692) | (ER) | |||
| WP_028077030.1 | (PF00903) | mitochondrial; (mitochondrial) | |||
| WP_028076929.1 | (PF13669) | mitochondrial; (mitochondrial) | |||
| WP_052180178.1 | (PF04199) | ER | |||
| WP_028073987.1 | (PF13692) (PF13579) | (ER) | |||
| WP_052178712.1 | (PF00801) | (ER) | |||
| WP_052179105.1 | (PF03098) | mitochondrial; (mitochondrial) | |||
| WP_037402485.1 | (PF00127) | ER | |||
| WP_028072916.1 | (PF00801) | ER; (ER) | |||
| WP_028074768.1 | (PF01557) | (ER) | |||
| WP_052179001.1 | (PF07883) | (mitochondrial) | |||
| WP_052179823.1 | (PF07883) | mitochondrial | |||
| WP_028073144.1 | PF01186 | ER | |||
| WP_037401902.1 | (PF09851) | ER | |||
| WP_052180000.1 | (PF09851) | (mitochondrial) | |||
| WP_028075239.1 | (PF00801) | ER | |||
| WP_028076691.1 | (PF13692) | (ER) | |||
| WP_037399187.1 | (PF00127) | ER | |||
| WP_037399097.1 | (PF00801) | ER | |||
| WP_028073736.1 | (PF01436) | ER | |||
| WP_028074362.1 | (PF12680) | ER | |||
| WP_028075363.1 | (PF02129) | ER | |||
| WP_028074381.1 | (PF13692) | mitochondrial | |||
| WP_028073270.1 | (PF00801) | ER | |||
| WP_028077016.1 | (PF13692) | mitochondrial; (mitochondrial) | |||
| WP_037396383.1 | (PF00723) | ER | |||
| WP_028074173.1 | (PF15780) | ER | |||
| WP_028076061.1 | (PF12680) | ER | |||
| WP_028076347.1 | (PF00127) | ER | |||
| WP_037397266.1 | (PF13579) | ER | |||
| WP_052178864.1 | (PF00127) | ER | |||
| WP_052179265.1 | PF01186 | ER | |||
| WP_028075680.1 | (PF00801) | ER | |||
| WP_028072771.1 | (PF00801) | (ER) | |||
| WP_028075902.1 | (PF13692) | ER | |||
| WP_052180412.1 | (PF00723) | ER | |||
| WP_028075636.1 | (PF09851) | ER | |||
| WP_052179213.1 | (PF02129) | ER | |||
| WP_052178551.1 | (PF00127) | (ER) | |||
| WP_028074176.1 | (PF13692) (PF13579) | ||||
| WP_028073113.1 | (PF00801) | (plastid) | |||
| WP_028072936.1 | (PF13669) | (plastid) | |||
| WP_052179912.1 | (PF01968) (PF05378) | ||||
| WP_028075159.1 | (PF13692) (PF13579) | ||||
| WP_028074779.1 | (PF01872) | (ER) | |||
| WP_028076086.1 | (PF02126) | (ER) | |||
| WP_028076069.1 | (PF01968) (PF05378) | ||||
| WP_028075976.1 | (PF06662) | (mitochondrial) | |||
| WP_052178944.1 | (PF02728) (PF01179) | ||||
| WP_028073537.1 | (PF06325) | (ER) | |||
| WP_028075387.1 | (PF01436) | (plastid) | |||
| WP_028076494.1 | (PF00801) | (mitochondrial) | |||
| WP_052179291.1 | (PF01968) (PF05378) | ||||
| WP_028076632.1 | (PF01968) (PF05378) | ||||
| WP_028073403.1 | (PF01557) | (plastid) | |||
| WP_028076499.1 | (PF13692) | (mitochondrial) | |||
| WP_052180532.1 | (PF02971) (PF07837) | ||||
| WP_028076057.1 | (PF01968) (PF05378) | ||||
| WP_037397026.1 | (PF13191) | (ER) | |||
| WP_028073694.1 | (PF12680) | (ER) | |||
| WP_037401547.1 | (PF02728) (PF01179) | ||||
| WP_037399929.1 | (PF12850) | plastid | |||
| WP_028074501.1 | (PF01968) (PF05378) | ||||
| WP_028076164.1 | (PF01557) | (mitochondrial) | |||
| WP_028075192.1 | (PF13191) | (plastid) | |||
| WP_028075663.1 | (PF00723) | (plastid) | |||
| WP_037396562.1 | (PF01968) (PF05378) | ||||
| WP_028074109.1 | (PF12680) | ||||
| WP_052178709.1 | (PF00903) | ||||
| WP_028073945.1 | (PF13191) | ||||
| WP_028072937.1 | (PF02538) | ||||
| WP_052179738.1 | (PF07883) | ||||
| WP_028074107.1 | (PF01872) | ||||
| WP_052179003.1 | (PF07883) | ||||
| WP_028074008.1 | (PF13692) | ||||
| WP_028073951.1 | (PF01872) | ||||
| WP_028074250.1 | (PF07883) | ||||
| WP_028074447.1 | (PF01557) | ||||
| WP_052179179.1 | (PF07883) | ||||
| WP_037399100.1 | (PF13191) | ||||
| WP_028074199.1 | (PF04199) | ||||
| WP_028076102.1 | (PF02126) | ||||
| WP_037396920.1 | (PF04199) | ||||
| WP_052178467.1 | (PF07883) | ||||
| WP_028076930.1 | (PF00903) | ||||
| WP_052179116.1 | (PF01557) | ||||
| WP_028076251.1 | (PF12680) | ||||
| WP_037399214.1 | (PF05988) | ||||
| WP_028072909.1 | (PF01872) | ||||
| WP_052179910.1 | (PF02538) | ||||
| WP_028072836.1 | (PF00903) | ||||
| WP_037401856.1 | (PF07883) | ||||
| WP_028076869.1 | (PF12680) | ||||
| WP_028073491.1 | (PF12850) | ||||
| WP_028074916.1 | (PF07883) | ||||
| WP_028076784.1 | (PF12850) | ||||
| WP_028074556.1 | (PF02129) | ||||
| WP_052178481.1 | (PF07883) | ||||
| WP_052180176.1 | PF10343 | ||||
| WP_052178942.1 | (PF04107) | ||||
| WP_028075655.1 | (PF09851) | ||||
| WP_028074720.1 | (PF13191) | ||||
| WP_052179878.1 | (PF04199) | ||||
| WP_028073397.1 | (PF12680) | ||||
| WP_052179577.1 | (PF04199) | ||||
| WP_052179971.1 | (PF00903) | ||||
| WP_028073258.1 | (PF04107) | ||||
| WP_037401596.1 | (PF12680) | ||||
| WP_052180425.1 | (PF02129) | ||||
| WP_028075364.1 | (PF00903) | ||||
| WP_037396837.1 | (PF07883) | ||||
| WP_052179315.1 | (PF13191) | ||||
| WP_028076133.1 | (PF01557) | ||||
| WP_028076149.1 | (PF00903) | ||||
| WP_028075308.1 | (PF05988) | ||||
| WP_028074105.1 | (PF07883) | ||||
| WP_028076166.1 | (PF00903) | ||||
| WP_028076300.1 | (PF13604) | ||||
| WP_028077128.1 | (PF07883) | ||||
| WP_028072978.1 | (PF07883) | ||||
| WP_028074685.1 | (PF01872) | ||||
| WP_028072970.1 | (PF13669) | ||||
| WP_028076093.1 | (PF02126) | ||||
| WP_037399200.1 | (PF02126) | ||||
| WP_052179359.1 | (PF01872) | ||||
| WP_052179958.1 | (PF07883) | ||||
| WP_052179595.1 | (PF13191) | ||||
| WP_028077170.1 | (PF00801) | ||||
| WP_028072738.1 | (PF00903) | ||||
| WP_028076928.1 | (PF13669) | ||||
| WP_028073686.1 | (PF01872) | ||||
| WP_028075839.1 | (PF00163) | ||||
| WP_052178984.1 | (PF00903) | ||||
| WP_052179689.1 | (PF04107) | ||||
| WP_028073203.1 | (PF12680) | ||||
| WP_028076868.1 | (PF01557) | ||||
| WP_052178480.1 | (PF01704) | ||||
| WP_052179276.1 | (PF13191) | ||||
| WP_037401397.1 | (PF12680) | ||||
| WP_028073534.1 | (PF01717) | ||||
| WP_052178547.1 | (PF13692) | ||||
| WP_028073493.1 | (PF13191) | ||||
| WP_028073228.1 | (PF13604) | ||||
| WP_028076181.1 | (PF12680) | ||||
| WP_037399223.1 | (PF07883) | ||||
| WP_028072780.1 | (PF13669) | ||||
| WP_028073569.1 | (PF00801) | ||||
| WP_052179868.1 | (PF02538) | ||||
| WP_052180244.1 | (PF13191) | ||||
| WP_052179167.1 | (PF04199) | ||||
| WP_037399309.1 | (PF12680) | ||||
| WP_028074525.1 | (PF13669) | ||||
| WP_052179344.1 | (PF07883) | ||||
| WP_028075842.1 | (PF00903) | ||||
| WP_052178816.1 | (PF01872) | ||||
| WP_028073876.1 | (PF12680) | ||||
| WP_052179529.1 | (PF03098) | ||||
| WP_028075384.1 | (PF12680) | ||||
| WP_037402550.1 | (PF12680) | ||||
| WP_028073094.1 | (PF00903) | ||||
| WP_028072908.1 | (PF13604) | ||||
| WP_028073325.1 | (PF12680) | ||||
| WP_037397181.1 | (PF06325) | ||||
| WP_052179854.1 | (PF02538) | ||||
| WP_052180538.1 | (PF07883) | ||||
| WP_028076364.1 | (PF13191) | ||||
| WP_028073690.1 | (PF00903) | ||||
| WP_028074830.1 | (PF01872) | ||||
| WP_028076932.1 | (PF01557) | ||||
| WP_037398807.1 | (PF06772) | ||||
| WP_052179661.1 | (PF12850) | ||||
| WP_028075608.1 | (PF13669) | ||||
| WP_052179292.1 | (PF02538) | ||||
| WP_028073219.1 | (PF13191) | ||||
| WP_052179932.1 | (PF12680) | ||||
| WP_037401850.1 | (PF13191) | ||||
| WP_028076848.1 | (PF06325) | ||||
| WP_028075760.1 | (PF00903) | ||||
| WP_052180522.1 | (PF07883) | ||||
| WP_028075180.1 | (PF13191) | ||||
| WP_028076771.1 | (PF00903) | ||||
| WP_028076237.1 | (PF00801) | ||||
| WP_052179618.1 | (PF04107) | ||||
| WP_028074384.1 | (PF13692) | ||||
| WP_028073015.1 | (PF12850) | ||||
| WP_028075177.1 | (PF13604) | ||||
| WP_028076931.1 | (PF00903) | ||||
| WP_028073532.1 | (PF01557) | ||||
| WP_052179480.1 | (PF15780) | ||||
| WP_028072746.1 | (PF00903) | ||||
| WP_028075330.1 | (PF06772) | ||||
| WP_028076256.1 | (PF07883) | ||||
| WP_028073451.1 | (PF00903) | ||||
| WP_052179603.1 | (PF13579) | ||||
| WP_052180023.1 | (PF00903) | ||||
| WP_052178886.1 | (PF00903) | ||||
| WP_037400747.1 | (PF00903) | ||||
| WP_052178598.1 | (PF02128) | ||||
| WP_028074445.1 | (PF04199) | ||||
| WP_028075726.1 | (PF06772) | ||||
| WP_037396798.1 | (PF09851) | ||||
| WP_052179429.1 | (PF07883) | ||||
| WP_028074476.1 | (PF04199) | ||||
| WP_028074527.1 | (PF01717) | ||||
| WP_028073536.1 | (PF01717) | ||||
| WP_028074757.1 | (PF13191) | ||||
| WP_028075507.1 | (PF13604) | ||||
| WP_028076463.1 | (PF12850) | ||||
| WP_052178454.1 | (PF12850) | ||||
| WP_028072778.1 | (PF01872) | ||||
| WP_028076212.1 | (PF00903) | ||||
| WP_052178765.1 | (PF00903) | ||||
| WP_028074500.1 | (PF01557) | ||||
| WP_028075049.1 | (PF01872) | ||||
| WP_052180516.1 | (PF00903) | ||||
| WP_037398770.1 | (PF01557) | ||||
| WP_028076150.1 | (PF01557) | ||||
| WP_028075629.1 | (PF00903) | ||||
| WP_028075635.1 | (PF00723) | ||||
| WP_052179947.1 | (PF00903) | ||||
| WP_028074854.1 | (PF03098) | ||||
| WP_037396479.1 | (PF05988) | ||||
| WP_052178752.1 | (PF07883) | ||||
| WP_037398889.1 | (PF13191) | ||||
| WP_052178587.1 | (PF07883) | ||||
| WP_028075759.1 | (PF00903) | ||||
| WP_028076752.1 | (PF01872) | ||||
| WP_028074171.1 | (PF13669) | ||||
| WP_028076481.1 | (PF06101) | ||||
| WP_028075597.1 | (PF13191) | ||||
| WP_028073014.1 | (PF00903) | ||||
| WP_028073811.1 | (PF07883) | ||||
| WP_028075625.1 | (PF05988) | ||||
| WP_028075306.1 | (PF12680) | ||||
| WP_028074770.1 | (PF00903) | ||||
| WP_052179943.1 | (PF13191) | ||||
| WP_028076257.1 | (PF01872) | ||||
| WP_037401377.1 | (PF04199) | ||||
| WP_028075882.1 | (PF00903) | ||||
| WP_028075098.1 | (PF06941) | ||||
| WP_037402490.1 | (PF13191) | ||||
| WP_028075848.1 | (PF00801) | ||||
| WP_052178785.1 | (PF01436) | ||||
| WP_028076058.1 | (PF00903) | ||||
| WP_028076345.1 | (PF13191) | ||||
| WP_028076633.1 | (PF02538) | ||||
| WP_028075219.1 | PF10343 | ||||
| WP_028073635.1 | (PF13191) | ||||
| WP_052179081.1 | (PF00723) | ||||
| WP_028074483.1 | (PF01557) | ||||
| WP_028077178.1 | (PF01704) | ||||
| WP_028075757.1 | (PF01872) | ||||
| WP_028074853.1 | (PF13191) | ||||
| WP_052179168.1 | (PF13875) | ||||
| WP_052180445.1 | (PF02129) | ||||
| WP_028077176.1 | (PF01872) | ||||
| WP_052180168.1 | (PF07883) | ||||
| WP_052179414.1 | (PF00801) | ||||
| WP_052179453.1 | (PF07883) | ||||
| WP_052179188.1 | (PF04199) | ||||
| WP_028076658.1 | (PF12850) | ||||
| WP_028073482.1 | (PF00163) | ||||
| WP_028074097.1 | (PF01872) | ||||
| WP_028073498.1 | (PF00903) | ||||
| WP_037402963.1 | (PF13191) | ||||
| WP_052179558.1 | (PF13692) | ||||
| WP_052180517.1 | (PF07883) | ||||
| WP_028076726.1 | (PF13191) | ||||
| WP_052179316.1 | (PF06772) | ||||
| WP_052179591.1 | (PF07883) | ||||
| WP_037398903.1 | (PF12680) | ||||
| WP_028076120.1 | (PF07883) | ||||
| WP_052179043.1 | PF05212 | ||||
| WP_052180557.1 | (PF02129) | ||||
| WP_028072939.1 | (PF12680) | ||||
| WP_028073661.1 | (PF00903) | ||||
| WP_028073349.1 | (PF13191) | ||||
| WP_028073561.1 | (PF07883) | ||||
| WP_052179181.1 | (PF00903) | ||||
| WP_037398892.1 | (PF13191) | ||||
| WP_028072825.1 | (PF01872) | ||||
| WP_052180184.1 | (PF13579) | ||||
| WP_052179410.1 | (PF01968) | ||||
| WP_037396680.1 | (PF12680) | ||||
| WP_028075758.1 | (PF01717) | ||||
| WP_028074868.1 | (PF00903) | ||||
| WP_052179163.1 | (PF12850) | ||||
| WP_028074850.1 | (PF00903) | ||||
| WP_028076999.1 | (PF04107) | ||||
| WP_028076480.1 | (PF07883) | ||||
| WP_052178858.1 | (PF13692) | ||||
| WP_037400617.1 | (PF07883) | ||||
| WP_052179581.1 | (PF02129) | ||||
| WP_028073200.1 | (PF12680) | ||||
| WP_028074899.1 | (PF01557) | ||||
| WP_028074502.1 | (PF02538) | ||||
| WP_028074839.1 | (PF00903) | ||||
| WP_052178621.1 | (PF07883) | ||||
| WP_028075122.1 | (PF06941) | ||||
| WP_028076271.1 | (PF01557) | ||||
| WP_028074366.1 | (PF13579) | ||||
| WP_028074108.1 | (PF07883) | ||||
| WP_028077090.1 | (PF06325) | ||||
| WP_028075720.1 | (PF07883) | ||||
| WP_028073600.1 | (PF12680) | ||||
| WP_052180450.1 | (PF13604) | ||||
| WP_052178761.1 | (PF00903) | ||||
| WP_028073526.1 | (PF00903) | ||||
| WP_028074688.1 | (PF13604) | ||||
| WP_052179625.1 | (PF07883) | ||||
| WP_028074487.1 | (PF01717) | ||||
| WP_028073018.1 | (PF07883) | ||||
| WP_052180457.1 | (PF01557) | ||||
| WP_028076119.1 | (PF01557) | ||||
| WP_028076368.1 | (PF01557) | ||||
| WP_028074776.1 | (PF13191) | ||||
| WP_052179969.1 | (PF00903) | ||||
| WP_028073533.1 | (PF01717) | ||||
| WP_037401361.1 | PF09724 | ||||
| WP_052179317.1 | (PF07883) | ||||
| WP_028076433.1 | (PF13191) | ||||
| WP_052180416.1 | (PF00903) | ||||
| WP_028074742.1 | (PF07883) | ||||
| WP_052180123.1 | (PF00903) | ||||
| WP_052179319.1 | (PF13191) | ||||
| WP_028073971.1 | (PF01872) | ||||
| WP_028076925.1 | (PF07883) | ||||
| WP_028076272.1 | (PF07883) | ||||
| WP_037401866.1 | (PF01872) | ||||
| WP_052178766.1 | (PF01557) | ||||
| WP_028074577.1 | (PF12680) | ||||
| WP_052179185.1 | (PF12680) | ||||
| WP_028076206.1 | (PF07883) | ||||
| WP_037401889.1 | (PF04107) | ||||
| WP_028075184.1 | (PF00903) | ||||
| WP_028074722.1 | (PF00903) | ||||
| WP_052178570.1 | (PF00723) | ||||
| WP_052179134.1 | (PF01872) | ||||
| WP_052179238.1 | (PF01436) | ||||
| WP_037402452.1 | (PF12680) | ||||
| WP_028076513.1 | (PF13191) | ||||
| WP_052179669.1 | (PF13191) | ||||
| WP_052180127.1 | (PF13191) | ||||
| WP_028073670.1 | (PF13191) | ||||
| WP_052180014.1 | (PF07883) | ||||
| WP_028075433.1 | (PF00903) | ||||
| WP_028073975.1 | (PF12680) | ||||
| WP_052179576.1 | (PF07883) | ||||
| WP_052178529.1 | (PF00903) | ||||
| WP_037401759.1 | (PF01557) |
Detailed merged results for each protein sequence
- Detailed merged results as table (merge_results.html)
- Detailed merged results as tab delimited file (merge_results.csv)
Individual results for each protein sequence
- EffectiveELD predictions (PROTEINS.ELD.TXT)
- Predotar predictions using animal/human model (Predotar_output_modelANIMAL.TXT)
- Predotar predictions using plant model (Predotar_output_modelPLANT.TXT)
Genome based results
Summary
- Gram negative: NO (FDR = 0.5 %)
- Functional Type III secretion system: N.D.
- Functional Type IV secretion system: NO (FDR = 7.2 %)
- Functional Type VI secretion system: N.D.
Individual results for each secretion system
Parameters:
==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=GENOTYPE
EMAIL=
==========================================================
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