Effective results for Verrucomicrobiae bacterium DG1235 (eggnog40)
Summary
Number of putative secreted proteins: 229
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 48 eukaryotic-like domains, contained in 229 proteins (48 high, 181 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None
Protein based results
Putative secreted proteins (weak evidence indicated by parentheses)
Protein | EffectiveT3 | EffectiveCCBD | T4SEpre | EffectiveELD | Predotar |
---|---|---|---|---|---|
382464.VDG1235_2847 | PF13517 PF07593 (PF13927) | ER | |||
382464.VDG1235_1121 | PF13517 PF07593 | ER; (ER) | |||
382464.VDG1235_1265 | PF13517 PF07593 | ER | |||
382464.VDG1235_2369 | PF13517 PF07593 | ER | |||
382464.VDG1235_1442 | PF13517 PF07593 | ER | |||
382464.VDG1235_3925 | PF13517 PF07593 | ER | |||
382464.VDG1235_4273 | PF13517 PF07593 (PF07679) | (ER) | |||
382464.VDG1235_4919 | PF13517 PF07593 | (ER) | |||
382464.VDG1235_664 | PF13517 PF07593 | ER | |||
382464.VDG1235_2299 | PF13517 PF07593 | ER | |||
382464.VDG1235_3051 | PF13517 PF07593 | ER | |||
382464.VDG1235_1329 | PF13517 PF07593 | ER | |||
382464.VDG1235_821 | PF13517 PF07593 | ER | |||
382464.VDG1235_1003 | (PF13927) (PF07679) | ER | |||
382464.VDG1235_3092 | PF13517 PF07593 | ER | |||
382464.VDG1235_1057 | (PF02424) | (mitochondrial) | |||
382464.VDG1235_2751 | (PF12704) | ER | |||
382464.VDG1235_3627 | (PF04616) | ER | |||
382464.VDG1235_1902 | (PF13927) | ER | |||
382464.VDG1235_793 | (PF12704) | (ER) | |||
382464.VDG1235_2105 | (PF04616) | ER | |||
382464.VDG1235_3295 | (PF00331) | ER | |||
382464.VDG1235_3985 | (PF06439) | ER | |||
382464.VDG1235_3964 | (PF04616) | ER | |||
382464.VDG1235_1467 | (PF02156) | ER | |||
382464.VDG1235_1927 | (PF04616) | ER; (ER) | |||
382464.VDG1235_1137 | (PF02424) | mitochondrial | |||
382464.VDG1235_3356 | (PF16403) | mitochondrial | |||
382464.VDG1235_3351 | (PF04366) | ER | |||
382464.VDG1235_475 | (PF08840) | ER | |||
382464.VDG1235_305 | (PF03544) | ER | |||
382464.VDG1235_1608 | (PF16499) | (mitochondrial) | |||
382464.VDG1235_1637 | (PF02156) | ER | |||
382464.VDG1235_169 | (PF03544) | ER | |||
382464.VDG1235_978 | (PF04616) | ER | |||
382464.VDG1235_2954 | (PF12704) | (mitochondrial) | |||
382464.VDG1235_684 | (PF03629) | ER | |||
382464.VDG1235_998 | PF07632 | ER | |||
382464.VDG1235_4667 | (PF12704) | (ER) | |||
382464.VDG1235_2219 | (PF04616) | ER | |||
382464.VDG1235_2386 | (PF12704) | ER | |||
382464.VDG1235_1622 | (PF16403) | ER | |||
382464.VDG1235_1623 | (PF04616) | ER | |||
382464.VDG1235_743 | PF02259 | ER | |||
382464.VDG1235_964 | (PF03190) | ER | |||
382464.VDG1235_1719 | (PF06439) | ER | |||
382464.VDG1235_2028 | (PF06439) | ER | |||
382464.VDG1235_2025 | (PF15979) | ER | |||
382464.VDG1235_987 | (PF07998) | ER | |||
382464.VDG1235_4520 | (PF12704) | ER | |||
382464.VDG1235_4419 | (PF03629) | ER | |||
382464.VDG1235_2719 | PF11074 | mitochondrial | |||
382464.VDG1235_1368 | (PF06439) | ER | |||
382464.VDG1235_2449 | (PF06965) | ER; (ER) | |||
382464.VDG1235_1898 | (PF12704) | (mitochondrial) | |||
382464.VDG1235_2034 | (PF06965) | (ER) | |||
382464.VDG1235_3813 | (PF12704) | ER | |||
382464.VDG1235_3811 | (PF03544) | ER | |||
382464.VDG1235_3815 | (PF04616) | ER | |||
382464.VDG1235_1769 | (PF12704) | (mitochondrial) | |||
382464.VDG1235_1763 | (PF04616) | ER | |||
382464.VDG1235_3545 | (PF06439) | ER | |||
382464.VDG1235_4605 | (PF03544) | ER | |||
382464.VDG1235_4603 | (PF16499) | ER | |||
382464.VDG1235_504 | (PF05548) | ER | |||
382464.VDG1235_727 | (PF12704) | (mitochondrial); mitochondrial | |||
382464.VDG1235_344 | PF13517 | ER | |||
382464.VDG1235_3808 | PF02018 | mitochondrial; (mitochondrial) | |||
382464.VDG1235_2287 | PF02018 | ER | |||
382464.VDG1235_1412 | PF07632 | ER | |||
382464.VDG1235_4278 | (PF15892) | ER | |||
382464.VDG1235_4612 | (PF02156) | ER | |||
382464.VDG1235_1346 | (PF12704) | (mitochondrial) | |||
382464.VDG1235_4916 | (PF03629) | ER | |||
382464.VDG1235_2180 | (PF06965) | ER | |||
382464.VDG1235_1198 | (PF03544) | ER | |||
382464.VDG1235_528 | PF13517 PF07593 | (ER) | |||
382464.VDG1235_2063 | PF07632 | ER | |||
382464.VDG1235_967 | (PF12704) | (mitochondrial) | |||
382464.VDG1235_2088 | (PF00331) | ER | |||
382464.VDG1235_878 | (PF16317) | (ER) | |||
382464.VDG1235_1694 | (PF06439) | mitochondrial | |||
382464.VDG1235_1693 | (PF12704) | mitochondrial; (mitochondrial) | |||
382464.VDG1235_464 | PF13517 | (mitochondrial) | |||
382464.VDG1235_3211 | (PF12704) | mitochondrial | |||
382464.VDG1235_3857 | (PF03629) | ER | |||
382464.VDG1235_285 | (PF06439) | ER | |||
382464.VDG1235_2092 | PF13517 PF07593 | (ER) | |||
382464.VDG1235_840 | (PF03544) | ER | |||
382464.VDG1235_2892 | PF02018 | ER | |||
382464.VDG1235_3204 | (PF12704) | ER; (ER) | |||
382464.VDG1235_274 | (PF13204) | ER | |||
382464.VDG1235_271 | (PF15892) | ER | |||
382464.VDG1235_292 | PF02018 | ER | |||
382464.VDG1235_2931 | PF02018 | ER | |||
382464.VDG1235_1302 | (PF06439) | ER | |||
382464.VDG1235_3065 | (PF12704) | (mitochondrial) | |||
382464.VDG1235_3274 | PF07632 | ER | |||
382464.VDG1235_1835 | (PF06439) | ER | |||
382464.VDG1235_3890 | (PF00331) | ER | |||
382464.VDG1235_4555 | (PF00331) | ER | |||
382464.VDG1235_4310 | (PF03544) | ER | |||
382464.VDG1235_4771 | (PF12704) | (ER); (mitochondrial) | |||
382464.VDG1235_1002 | (PF13347) | ER | |||
382464.VDG1235_2349 | (PF00331) | (mitochondrial) | |||
382464.VDG1235_2431 | (PF16403) | ER | |||
382464.VDG1235_2327 | (PF03629) | (mitochondrial) | |||
382464.VDG1235_2223 | (PF03629) | ER | |||
382464.VDG1235_2220 | (PF12704) | ER | |||
382464.VDG1235_907 | PF13517 | mitochondrial; (mitochondrial) | |||
382464.VDG1235_121 | (PF03190) | ER | |||
382464.VDG1235_634 | PF13517 | ER | |||
382464.VDG1235_638 | (PF02156) | ER | |||
382464.VDG1235_836 | (PF12006) | ER | |||
382464.VDG1235_1254 | (PF00331) | ER | |||
382464.VDG1235_2910 | (PF00331) | ER | |||
382464.VDG1235_2913 | (PF03544) | ER | |||
382464.VDG1235_4300 | (PF12704) | ER | |||
382464.VDG1235_2689 | (PF04366) | ER | |||
382464.VDG1235_4971 | (PF03190) | ER | |||
382464.VDG1235_2351 | PF13517 | ER | |||
382464.VDG1235_2231 | (PF03544) | ER | |||
382464.VDG1235_930 | (PF00685) | mitochondrial; (mitochondrial) | |||
382464.VDG1235_1240 | (PF16499) | ER | |||
382464.VDG1235_4572 | (PF12704) | (mitochondrial) | |||
382464.VDG1235_4209 | (PF04616) | (ER) | |||
382464.VDG1235_95 | (PF02424) | ER | |||
382464.VDG1235_1119 | (PF02156) | ER | |||
382464.VDG1235_3746 | (PF06439) | ER | |||
382464.VDG1235_149 | (PF04366) | ER | |||
382464.VDG1235_1275 | (PF16760) | ER | |||
382464.VDG1235_4749 | (PF00685) | (mitochondrial) | |||
382464.VDG1235_1293 | PF13517 PF07593 | ||||
382464.VDG1235_3349 | (PF03522) | (ER) | |||
382464.VDG1235_2588 | (PF15979) | (ER) | |||
382464.VDG1235_1604 | (PF03544) | (mitochondrial) | |||
382464.VDG1235_4091 | PF02018 | (plastid) | |||
382464.VDG1235_2440 | PF13517 PF07593 | ||||
382464.VDG1235_1379 | PF02018 PF13517 | ||||
382464.VDG1235_4287 | PF13517 PF07593 | ||||
382464.VDG1235_4823 | PF13517 PF02018 | ||||
382464.VDG1235_3137 | PF13517 PF07593 | ||||
382464.VDG1235_1328 | (PF04432) (PF04422) | ||||
382464.VDG1235_75 | (PF04432) (PF04422) | ||||
382464.VDG1235_1334 | (PF04432) (PF04422) | ||||
382464.VDG1235_276 | PF02018 | (plastid) | |||
382464.VDG1235_4812 | (PF12704) | (ER) | |||
382464.VDG1235_4972 | PF13517 PF07593 | not used | |||
382464.VDG1235_484 | (PF15892) | plastid | |||
382464.VDG1235_4362 | (PF13347) | ||||
382464.VDG1235_3534 | (PF13347) | ||||
382464.VDG1235_4042 | (PF00331) | ||||
382464.VDG1235_1056 | (PF16499) | ||||
382464.VDG1235_2213 | (PF05185) | ||||
382464.VDG1235_551 | (PF03629) | ||||
382464.VDG1235_172 | (PF03544) | ||||
382464.VDG1235_1468 | (PF00176) | ||||
382464.VDG1235_3431 | (PF02424) | ||||
382464.VDG1235_3432 | (PF13366) | ||||
382464.VDG1235_1595 | (PF08547) | ||||
382464.VDG1235_1286 | (PF03544) | ||||
382464.VDG1235_1130 | (PF03544) | ||||
382464.VDG1235_2173 | (PF04616) | ||||
382464.VDG1235_2179 | (PF00176) | ||||
382464.VDG1235_2178 | (PF00176) | ||||
382464.VDG1235_947 | (PF12704) | ||||
382464.VDG1235_303 | PF07534 | ||||
382464.VDG1235_3168 | (PF12038) | ||||
382464.VDG1235_991 | (PF12704) | ||||
382464.VDG1235_2945 | (PF12006) | ||||
382464.VDG1235_2949 | (PF13347) | ||||
382464.VDG1235_2385 | (PF13204) | ||||
382464.VDG1235_1160 | (PF04616) | ||||
382464.VDG1235_3002 | (PF00176) | ||||
382464.VDG1235_3143 | (PF12704) | ||||
382464.VDG1235_223 | (PF03544) | ||||
382464.VDG1235_350 | (PF13366) | ||||
382464.VDG1235_1762 | (PF13347) | ||||
382464.VDG1235_2852 | PF02018 | ||||
382464.VDG1235_4113 | (PF13366) | ||||
382464.VDG1235_1886 | (PF04305) | ||||
382464.VDG1235_3938 | PF11074 | ||||
382464.VDG1235_3931 | (PF03544) | ||||
382464.VDG1235_4070 | (PF00331) | ||||
382464.VDG1235_4274 | (PF08840) | ||||
382464.VDG1235_3552 | (PF03190) | ||||
382464.VDG1235_2739 | (PF07646) | ||||
382464.VDG1235_2516 | (PF03544) | ||||
382464.VDG1235_408 | (PF03629) | ||||
382464.VDG1235_403 | (PF06965) | ||||
382464.VDG1235_390 | PF09488 | ||||
382464.VDG1235_1982 | (PF02424) | ||||
382464.VDG1235_4597 | (PF03544) | ||||
382464.VDG1235_4590 | (PF01704) | ||||
382464.VDG1235_4620 | (PF13366) | ||||
382464.VDG1235_1355 | (PF12704) | ||||
382464.VDG1235_2060 | (PF04616) | ||||
382464.VDG1235_256 | (PF00176) | ||||
382464.VDG1235_3558 | (PF04616) | ||||
382464.VDG1235_3109 | (PF00176) | ||||
382464.VDG1235_3102 | (PF04616) | ||||
382464.VDG1235_3105 | (PF04305) | ||||
382464.VDG1235_846 | (PF03544) | ||||
382464.VDG1235_3455 | (PF00176) | ||||
382464.VDG1235_1337 | (PF08547) | ||||
382464.VDG1235_2410 | (PF04616) | ||||
382464.VDG1235_294 | (PF04616) | ||||
382464.VDG1235_101 | (PF13347) | ||||
382464.VDG1235_4499 | (PF12704) | ||||
382464.VDG1235_1307 | (PF13875) | ||||
382464.VDG1235_919 | (PF04616) | ||||
382464.VDG1235_1536 | (PF13366) | ||||
382464.VDG1235_825 | (PF13347) | ||||
382464.VDG1235_2929 | (PF00331) | ||||
382464.VDG1235_4318 | (PF04616) | ||||
382464.VDG1235_3093 | PF02018 | ||||
382464.VDG1235_3880 | PF13517 | ||||
382464.VDG1235_126 | (PF13366) | ||||
382464.VDG1235_1492 | (PF13347) | ||||
382464.VDG1235_4304 | (PF03803) | ||||
382464.VDG1235_2350 | (PF13347) | ||||
382464.VDG1235_2236 | (PF00685) | ||||
382464.VDG1235_159 | (PF01704) | ||||
382464.VDG1235_3518 | (PF00176) | ||||
382464.VDG1235_2126 | (PF04616) | ||||
382464.VDG1235_98 | (PF00685) | ||||
382464.VDG1235_1668 | (PF12704) | ||||
382464.VDG1235_1666 | (PF02156) | ||||
382464.VDG1235_1472 | PF12689 |
Detailed merged results for each protein sequence
- Detailed merged results as table (merge_results.html)
- Detailed merged results as tab delimited file (merge_results.csv)
Individual results for each protein sequence
- EffectiveELD predictions (PROTEINS.ELD.TXT)
- Predotar predictions using animal/human model (Predotar_output_modelANIMAL.TXT)
- Predotar predictions using plant model (Predotar_output_modelPLANT.TXT)