Metamenu

Effective results for Haloplasma contractile SSD-17B (eggnog40)

Summary

Number of putative secreted proteins: 240
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 67 eukaryotic-like domains, contained in 240 proteins (42 high, 198 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
1033810.HLPCO_02027(PF02494) PF16403ER
1033810.HLPCO_08599(PF02494) PF16403ER
1033810.HLPCO_06580(PF02494) PF16403ER
1033810.HLPCO_00090(PF04893)ER
1033810.HLPCO_00650(PF05154)(mitochondrial)
1033810.HLPCO_13144(PF02810)(mitochondrial)
1033810.HLPCO_02960(PF14667)ER
1033810.HLPCO_14779PF03714ER
1033810.HLPCO_14174PF03714ER
1033810.HLPCO_07894(PF14667)ER
1033810.HLPCO_14769PF16403ER
1033810.HLPCO_17746(PF14667)ER
1033810.HLPCO_04820(PF14667)(mitochondrial)
1033810.HLPCO_09352(PF02690)ER
1033810.HLPCO_00195PF16403ER
1033810.HLPCO_00530PF16403ER
1033810.HLPCO_16146PF16403ER
1033810.HLPCO_07334(PF14667)ER
1033810.HLPCO_14824(PF04893)ER
1033810.HLPCO_09007(PF13306)ER
1033810.HLPCO_07324PF16403ER
1033810.HLPCO_17891(PF14478)ER
1033810.HLPCO_02880(PF05173)(mitochondrial)
1033810.HLPCO_05205PF16403ER
1033810.HLPCO_08784(PF02535)(ER)
1033810.HLPCO_17886(PF14478)ER
1033810.HLPCO_08234PF16403ER
1033810.HLPCO_05500PF16403ER
1033810.HLPCO_01685(PF02535)(ER)
1033810.HLPCO_13624(PF13306)ER
1033810.HLPCO_08484(PF08245)ER
1033810.HLPCO_02194(PF02690)ER
1033810.HLPCO_16741(PF13306)ER
1033810.HLPCO_01987(PF02810)(ER)
1033810.HLPCO_08967(PF05154)(mitochondrial)
1033810.HLPCO_09988PF16403ER
1033810.HLPCO_07969(PF13306)ER
1033810.HLPCO_09227(PF05154)(ER); ER
1033810.HLPCO_11593PF16403ER
1033810.HLPCO_00610(PF13306)ER
1033810.HLPCO_11598PF16403ER
1033810.HLPCO_19241(PF02535)ER
1033810.HLPCO_17756PF16403ER
1033810.HLPCO_02072(PF05154)(ER); ER
1033810.HLPCO_19938PF16403ER
1033810.HLPCO_14799PF03714ER
1033810.HLPCO_11308PF16403ER
1033810.HLPCO_04965PF16403ER
1033810.HLPCO_11413PF16403ER
1033810.HLPCO_07834PF16403ER
1033810.HLPCO_14784PF03714ER
1033810.HLPCO_08134(PF14526)(mitochondrial)
1033810.HLPCO_08724PF16403ER
1033810.HLPCO_17246(PF13306)ER
1033810.HLPCO_07194(PF14478)ER
1033810.HLPCO_16046(PF14526)(mitochondrial)
1033810.HLPCO_15886(PF13306)ER
1033810.HLPCO_00390PF16403(ER)
1033810.HLPCO_05100(PF04893)ER
1033810.HLPCO_10053(PF14667)ER
1033810.HLPCO_06455PF16403ER
1033810.HLPCO_07189(PF14478)ER
1033810.HLPCO_17446(PF14714)(mitochondrial)
1033810.HLPCO_07794(PF01016)(mitochondrial)
1033810.HLPCO_19958(PF00075) (PF01693)
1033810.HLPCO_02305(PF13087) (PF13086)
1033810.HLPCO_05325PF12746(mitochondrial)
1033810.HLPCO_10273(PF05034) (PF07476)
1033810.HLPCO_09587(PF00750) (PF03485)
1033810.HLPCO_07934(PF00075) (PF01693)
1033810.HLPCO_00310PF12746(mitochondrial)
1033810.HLPCO_09452(PF13087) (PF13086)
1033810.HLPCO_09948(PF01016)(mitochondrial)
1033810.HLPCO_16281(PF07837) (PF02971)
1033810.HLPCO_04855(PF01725)(mitochondrial)
1033810.HLPCO_05725(PF13087) (PF13086)
1033810.HLPCO_02440(PF00750) (PF03485)
1033810.HLPCO_08369(PF07837) (PF02971)
1033810.HLPCO_07634(PF14714)(mitochondrial)
1033810.HLPCO_05390(PF01725)(mitochondrial)
1033810.HLPCO_14134(PF00750) (PF03485)
1033810.HLPCO_19903(PF13087) (PF13086)
1033810.HLPCO_01070(PF06189)(mitochondrial)
1033810.HLPCO_10233(PF01709)(mitochondrial)
1033810.HLPCO_16056(PF02938)
1033810.HLPCO_17876PF12746
1033810.HLPCO_02355(PF00075)
1033810.HLPCO_14219(PF05154)
1033810.HLPCO_05915(PF01432)
1033810.HLPCO_17781(PF13558)
1033810.HLPCO_06884(PF01869)
1033810.HLPCO_07864(PF05491)
1033810.HLPCO_18206(PF01869)
1033810.HLPCO_01100(PF00958)
1033810.HLPCO_09472(PF12437)
1033810.HLPCO_20174PF16403
1033810.HLPCO_14004(PF14526)
1033810.HLPCO_17456(PF02224)
1033810.HLPCO_17101(PF14526)
1033810.HLPCO_00520PF16403not used
1033810.HLPCO_13889(PF01257)
1033810.HLPCO_18456(PF02810)
1033810.HLPCO_07659(PF01264)
1033810.HLPCO_09082PF16403
1033810.HLPCO_15184(PF01432)
1033810.HLPCO_03790(PF01432)
1033810.HLPCO_05060(PF01869)
1033810.HLPCO_10003(PF01709)
1033810.HLPCO_16886(PF14526)
1033810.HLPCO_02765(PF14249)
1033810.HLPCO_02325(PF12437)
1033810.HLPCO_09582(PF05066)
1033810.HLPCO_09632(PF02527)
1033810.HLPCO_00535PF16403not used
1033810.HLPCO_01555(PF01257)
1033810.HLPCO_17721(PF01795)
1033810.HLPCO_06789(PF06723)
1033810.HLPCO_06784(PF06723)
1033810.HLPCO_07784(PF00829)
1033810.HLPCO_18581(PF02810)
1033810.HLPCO_12503(PF01869)
1033810.HLPCO_09938(PF00829)
1033810.HLPCO_00050(PF01869)
1033810.HLPCO_12028(PF06777)
1033810.HLPCO_01545(PF01257)
1033810.HLPCO_18116(PF16889)
1033810.HLPCO_05680(PF01264)
1033810.HLPCO_05685(PF01761)
1033810.HLPCO_17421(PF01264)
1033810.HLPCO_10023(PF05491)
1033810.HLPCO_07684(PF13735)
1033810.HLPCO_07204PF12746
1033810.HLPCO_06330PF12746
1033810.HLPCO_02435(PF05066)
1033810.HLPCO_02430(PF06418)
1033810.HLPCO_03120(PF00882)
1033810.HLPCO_08219(PF01257)
1033810.HLPCO_04305(PF02810)
1033810.HLPCO_20312(PF02535)not used
1033810.HLPCO_08144(PF02938)
1033810.HLPCO_17631(PF02873)
1033810.HLPCO_04870PF02026
1033810.HLPCO_17381(PF08245)
1033810.HLPCO_17701(PF08245)
1033810.HLPCO_17416(PF01761)
1033810.HLPCO_07699(PF08245)
1033810.HLPCO_18496(PF13558)
1033810.HLPCO_19858(PF11074)
1033810.HLPCO_09953(PF01018)
1033810.HLPCO_03935(PF09818)
1033810.HLPCO_08204(PF01257)
1033810.HLPCO_08209(PF02906)
1033810.HLPCO_18811(PF05495)
1033810.HLPCO_00365(PF06723)
1033810.HLPCO_00360(PF06723)
1033810.HLPCO_01560(PF02906)
1033810.HLPCO_17396(PF13735)
1033810.HLPCO_07914(PF02580)
1033810.HLPCO_19061PF02893
1033810.HLPCO_07359(PF01795)
1033810.HLPCO_17401(PF05173)
1033810.HLPCO_16576(PF14667)
1033810.HLPCO_16116(PF01257)
1033810.HLPCO_16751(PF13238)
1033810.HLPCO_14669(PF06189)
1033810.HLPCO_04075(PF05495)
1033810.HLPCO_01190(PF01432)
1033810.HLPCO_09767(PF02403)
1033810.HLPCO_18521(PF02810)
1033810.HLPCO_13629(PF13306)
1033810.HLPCO_02620(PF02403)
1033810.HLPCO_16291(PF04961)
1033810.HLPCO_12914(PF14526)
1033810.HLPCO_08224(PF02906)
1033810.HLPCO_03000(PF01432)
1033810.HLPCO_03710(PF00882)
1033810.HLPCO_00165(PF01869)
1033810.HLPCO_09577(PF06418)
1033810.HLPCO_10193PF12746
1033810.HLPCO_13899(PF02906)
1033810.HLPCO_05405PF02026
1033810.HLPCO_07379(PF08245)
1033810.HLPCO_07624(PF02224)
1033810.HLPCO_16131(PF01257)
1033810.HLPCO_16136(PF02906)
1033810.HLPCO_03870(PF01432)
1033810.HLPCO_04430(PF02810)
1033810.HLPCO_04545(PF12643)
1033810.HLPCO_06964(PF16889)
1033810.HLPCO_01405(PF08245)
1033810.HLPCO_17691(PF08245)
1033810.HLPCO_18721(PF09962)
1033810.HLPCO_17236(PF13238)
1033810.HLPCO_07799(PF01018)
1033810.HLPCO_18341(PF12643)
1033810.HLPCO_13894(PF01257)
1033810.HLPCO_16121(PF02906)
1033810.HLPCO_07389(PF08245)
1033810.HLPCO_10073(PF02580)
1033810.HLPCO_16656(PF02690)
1033810.HLPCO_08379(PF04961)
1033810.HLPCO_20120(PF13306)not used
1033810.HLPCO_20125(PF13306)not used
1033810.HLPCO_05175(PF01869)
1033810.HLPCO_06779(PF06723)
1033810.HLPCO_01525(PF02906)
1033810.HLPCO_06804(PF06723)
1033810.HLPCO_13074(PF13238)
1033810.HLPCO_07954(PF02580)not used
1033810.HLPCO_16791(PF03590)
1033810.HLPCO_17196(PF03590)
1033810.HLPCO_09502(PF00075)
1033810.HLPCO_01395(PF08245)
1033810.HLPCO_01060(PF13558)
1033810.HLPCO_12483(PF08245)
1033810.HLPCO_02485(PF02527)
1033810.HLPCO_04390(PF13558)
1033810.HLPCO_05570(PF13306)
1033810.HLPCO_00385(PF05154)
1033810.HLPCO_11408(PF08245)
1033810.HLPCO_08729PF16403
1033810.HLPCO_17331(PF02690)
1033810.HLPCO_19686(PF14667)
1033810.HLPCO_07449(PF02873)
1033810.HLPCO_07844(PF01709)
1033810.HLPCO_05620(PF06723)
1033810.HLPCO_07664(PF01761)
1033810.HLPCO_03745(PF00882)
1033810.HLPCO_04365(PF02810)
1033810.HLPCO_11543(PF12643)
1033810.HLPCO_04165(PF09962)
1033810.HLPCO_18951(PF09818)
1033810.HLPCO_20110(PF13306)not used
1033810.HLPCO_20115(PF13306)not used
1033810.HLPCO_00405(PF14526)
1033810.HLPCO_11893(PF01725)
1033810.HLPCO_05585(PF00958)not used
1033810.HLPCO_06450PF16403
1033810.HLPCO_07299(PF13558)
1033810.HLPCO_07679(PF05173)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: NO (FDR = 0.5 %)
  • Functional Type III secretion system: N.D.
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: N.D.

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================