Metamenu

Effective results for Dysgonomonas mossii DSM 22836 (eggnog40)

Summary

Number of putative secreted proteins: 103
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 42 eukaryotic-like domains, contained in 103 proteins (17 high, 86 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
742767.HMPREF9456_02564(PF16334) (PF16335) (PF17168) (PF08760)ER
742767.HMPREF9456_01107(PF14310) (PF00933) (PF01915)ER
742767.HMPREF9456_00760(PF14310) (PF00933) (PF01915)ER
742767.HMPREF9456_01110(PF14310) (PF00933) (PF01915)ER
742767.HMPREF9456_02542(PF14310) (PF00933) (PF01915)(ER)
742767.HMPREF9456_02543(PF14310) (PF00933) (PF01915)ER
742767.HMPREF9456_01767(PF14310) (PF00933) (PF01915)ER
742767.HMPREF9456_01161(PF14310) (PF00933) (PF01915)ER
742767.HMPREF9456_00131(PF14310) (PF00933) (PF01915)ER
742767.HMPREF9456_01147(PF14310) (PF00933) (PF01915)ER
742767.HMPREF9456_00331(PF14310) (PF00933) (PF01915)ER
742767.HMPREF9456_03177(PF14310) (PF00933) (PF01915)ER
742767.HMPREF9456_03097(PF14310) (PF00933) (PF01915)ER
742767.HMPREF9456_03180(PF14310) (PF00933) (PF01915)ER
742767.HMPREF9456_03159(PF09112) (PF09113)ER
742767.HMPREF9456_00333(PF02055) (PF17189)ER
742767.HMPREF9456_00332(PF02055) (PF17189)ER
742767.HMPREF9456_01509(PF00933) (PF01915)ER
742767.HMPREF9456_00748(PF02055) (PF17189)ER
742767.HMPREF9456_01112(PF16338)ER
742767.HMPREF9456_02946(PF03432)(mitochondrial)
742767.HMPREF9456_00966(PF13905)ER
742767.HMPREF9456_02549PF07971ER
742767.HMPREF9456_02492(PF06824)ER
742767.HMPREF9456_02490(PF03663)ER
742767.HMPREF9456_02491(PF03663)ER
742767.HMPREF9456_00893(PF13905)ER
742767.HMPREF9456_02305(PF13905)ER
742767.HMPREF9456_02303(PF13905)ER
742767.HMPREF9456_01765(PF02156)ER
742767.HMPREF9456_01766(PF02156)ER
742767.HMPREF9456_02153PF03269mitochondrial; (mitochondrial)
742767.HMPREF9456_02154(PF01531)(mitochondrial)
742767.HMPREF9456_01775(PF02156)ER
742767.HMPREF9456_00048(PF00933)ER
742767.HMPREF9456_00110PF07971ER
742767.HMPREF9456_02569(PF03663)ER
742767.HMPREF9456_02215PF07971ER
742767.HMPREF9456_02213PF07971ER
742767.HMPREF9456_00301PF07971ER
742767.HMPREF9456_00126(PF03629)ER
742767.HMPREF9456_00051PF07971ER
742767.HMPREF9456_00933PF07971ER
742767.HMPREF9456_00935(PF04450)ER
742767.HMPREF9456_00934PF07971ER
742767.HMPREF9456_00061PF07971ER
742767.HMPREF9456_02505PF07971ER
742767.HMPREF9456_02314(PF02275)ER
742767.HMPREF9456_02531(PF03629)ER
742767.HMPREF9456_01848(PF01715)(mitochondrial)
742767.HMPREF9456_00871(PF13905)ER
742767.HMPREF9456_02528(PF07168)ER
742767.HMPREF9456_02060(PF13905)ER
742767.HMPREF9456_02270(PF03629)ER
742767.HMPREF9456_02274(PF16338)ER
742767.HMPREF9456_03132(PF02275)ER
742767.HMPREF9456_03134PF07971ER
742767.HMPREF9456_02283(PF03629)ER
742767.HMPREF9456_00286(PF02275)ER
742767.HMPREF9456_00757(PF02156)ER
742767.HMPREF9456_02870(PF03432)(mitochondrial)
742767.HMPREF9456_00775(PF16338)ER
742767.HMPREF9456_02103(PF03331)(mitochondrial)
742767.HMPREF9456_02581PF07971ER
742767.HMPREF9456_02583(PF13653)ER
742767.HMPREF9456_00794(PF01531)(mitochondrial)
742767.HMPREF9456_00140(PF07837) (PF02971)
742767.HMPREF9456_01340(PF03092)(ER)
742767.HMPREF9456_00299(PF06824)(ER)
742767.HMPREF9456_02114PF03727 PF00349
742767.HMPREF9456_01030(PF05192)
742767.HMPREF9456_00612(PF16011)
742767.HMPREF9456_01368(PF08713)
742767.HMPREF9456_02834(PF03432)
742767.HMPREF9456_01168(PF05192)
742767.HMPREF9456_00365(PF05192)
742767.HMPREF9456_00789(PF04519)
742767.HMPREF9456_00787(PF04519)
742767.HMPREF9456_01577(PF08713)
742767.HMPREF9456_01171(PF04505)
742767.HMPREF9456_02365(PF08713)
742767.HMPREF9456_00302(PF01715)
742767.HMPREF9456_00052PF07971
742767.HMPREF9456_02512(PF04519)
742767.HMPREF9456_02514(PF04519)
742767.HMPREF9456_02222PF07971
742767.HMPREF9456_00224(PF01531)
742767.HMPREF9456_03007(PF03432)
742767.HMPREF9456_03292(PF04505)
742767.HMPREF9456_00873(PF04519)
742767.HMPREF9456_00679(PF08713)
742767.HMPREF9456_00011(PF03331)
742767.HMPREF9456_00817(PF05693)
742767.HMPREF9456_02476(PF13906)
742767.HMPREF9456_01545(PF08357)
742767.HMPREF9456_02911(PF04519)
742767.HMPREF9456_02700(PF08713)
742767.HMPREF9456_02909(PF04519)
742767.HMPREF9456_01720(PF16314)
742767.HMPREF9456_01342PF16269
742767.HMPREF9456_00741(PF03432)
742767.HMPREF9456_02932(PF03331)
742767.HMPREF9456_02339(PF03432)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: YES (FDR = 0.5 %)
  • Functional Type III secretion system: NO (FDR = 12.5 %)
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: NO (FDR = 7.7 %)

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================