Metamenu

Effective results for Bacteroides caccae ATCC 43185 (eggnog40)

Summary

Number of putative secreted proteins: 230
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 71 eukaryotic-like domains, contained in 230 proteins (58 high, 172 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
411901.BACCAC_01713(PF00703) (PF13287) (PF02836) (PF16353) (PF02929) (PF02837) (PF00754)ER
411901.BACCAC_02846(PF00703) (PF02929) (PF16353) (PF02837) (PF02836)ER
411901.BACCAC_01526(PF16353) (PF02929) (PF00703) (PF02837) (PF02836)(ER)
411901.BACCAC_01836(PF16353) (PF02929) (PF00703) (PF02837) (PF02836)ER
411901.BACCAC_01085(PF00754) (PF13287) (PF02838) (PF00728)ER
411901.BACCAC_01322(PF00703) (PF16355) (PF02837) (PF02836)ER
411901.BACCAC_02088(PF00703) (PF16355) (PF02837) (PF02836)(ER)
411901.BACCAC_03890(PF00703) (PF16355) (PF02837) (PF02836)ER
411901.BACCAC_02845(PF13287) (PF02838) (PF00728)ER
411901.BACCAC_01084(PF00754) (PF02838) (PF00728)ER
411901.BACCAC_01249(PF00703) (PF02837) (PF02836)ER
411901.BACCAC_03598(PF00703) (PF02837) (PF02836)ER
411901.BACCAC_02529PF05089 PF12972 PF12971ER
411901.BACCAC_01972PF05089 PF12972 PF12971ER
411901.BACCAC_01779(PF13364) (PF02837) (PF01301)ER
411901.BACCAC_02896(PF00703) (PF02837) (PF02836)ER
411901.BACCAC_00013(PF00703) (PF02837) (PF02836)ER
411901.BACCAC_01371(PF00703) (PF02837) (PF02836)ER
411901.BACCAC_03308(PF08124) (PF02884) (PF02278)ER
411901.BACCAC_00255PF05089 PF12972 PF12971ER
411901.BACCAC_01783(PF00703) (PF16355) (PF02837) (PF02836)
411901.BACCAC_01782(PF00754) PF13402ER
411901.BACCAC_02615(PF00703) (PF16355) (PF02837) (PF02836)
411901.BACCAC_02847(PF00754) (PF01120)ER
411901.BACCAC_03645(PF02838) (PF00728)ER
411901.BACCAC_01089(PF02838) (PF00728)ER
411901.BACCAC_03747(PF02838) (PF00728)ER
411901.BACCAC_03662(PF02838) (PF00728)(ER)
411901.BACCAC_01244(PF00703) (PF02837)ER
411901.BACCAC_01241(PF07470) (PF07940)ER
411901.BACCAC_03741(PF02838) (PF00728)ER
411901.BACCAC_01538(PF02884) (PF02278)ER
411901.BACCAC_03594(PF02838) (PF00728)ER
411901.BACCAC_01368(PF00754) PF13402ER
411901.BACCAC_02711(PF00754) (PF01120)ER
411901.BACCAC_03623(PF03051) (PF00112)ER
411901.BACCAC_02384(PF08124) (PF02278)ER
411901.BACCAC_02807(PF02838) (PF00728)ER
411901.BACCAC_02819(PF02838) (PF00728)ER
411901.BACCAC_01850(PF00754) PF13402ER
411901.BACCAC_01859(PF00754) PF13402ER
411901.BACCAC_03332(PF00754) (PF01120)ER
411901.BACCAC_01841(PF00754) PF13402ER
411901.BACCAC_00257(PF01301) (PF00754)ER
411901.BACCAC_03226(PF01301) (PF00754)ER
411901.BACCAC_01653(PF05140)ER; (mitochondrial)
411901.BACCAC_00783(PF03415)ER
411901.BACCAC_00434(PF12437)mitochondrial; (mitochondrial)
411901.BACCAC_02661(PF01120)ER
411901.BACCAC_01267PF16116ER
411901.BACCAC_02680(PF00722)ER
411901.BACCAC_01339(PF01120)ER
411901.BACCAC_02064(PF16871)ER
411901.BACCAC_02679(PF00722)ER
411901.BACCAC_02472(PF14684)ER
411901.BACCAC_01323(PF07470)ER
411901.BACCAC_00111(PF00754)ER
411901.BACCAC_03242(PF07470)ER
411901.BACCAC_03480PF13905ER
411901.BACCAC_01747(PF07470)ER
411901.BACCAC_01245(PF00754)ER
411901.BACCAC_01242(PF00754)ER
411901.BACCAC_01334PF10022ER
411901.BACCAC_03474PF13402ER
411901.BACCAC_02226(PF00754)ER
411901.BACCAC_01536(PF07470)ER
411901.BACCAC_01347(PF01120)ER
411901.BACCAC_03616(PF01120)ER
411901.BACCAC_03612PF13402ER; (ER)
411901.BACCAC_03595(PF02838)ER
411901.BACCAC_01509(PF02278)ER
411901.BACCAC_01505PF13905ER
411901.BACCAC_03135(PF01833)ER
411901.BACCAC_00176PF13905ER
411901.BACCAC_02953(PF13653)ER
411901.BACCAC_03604(PF00754)ER
411901.BACCAC_01971(PF01301)ER
411901.BACCAC_01778(PF00754)ER
411901.BACCAC_02720(PF13415)ER
411901.BACCAC_02897PF13402ER
411901.BACCAC_00161PF13402ER
411901.BACCAC_01386(PF00754)ER
411901.BACCAC_00014(PF07470)ER
411901.BACCAC_00017PF10022ER
411901.BACCAC_01566(PF03275)(ER)
411901.BACCAC_03158(PF02544)ER
411901.BACCAC_03154(PF13086)mitochondrial
411901.BACCAC_02400PF13854ER
411901.BACCAC_03841(PF01120)ER
411901.BACCAC_02718(PF03051)ER
411901.BACCAC_01376PF13402ER
411901.BACCAC_01377PF13402ER
411901.BACCAC_03621(PF07940)ER
411901.BACCAC_01952(PF13086)ER
411901.BACCAC_01395PF13905ER
411901.BACCAC_00025PF13905ER
411901.BACCAC_00026PF17170ER
411901.BACCAC_00020(PF07470)ER
411901.BACCAC_00847PF17170ER
411901.BACCAC_02376PF13905ER
411901.BACCAC_01921(PF07470)(mitochondrial)
411901.BACCAC_00853PF17170mitochondrial; (mitochondrial)
411901.BACCAC_01250(PF01120)ER
411901.BACCAC_01496PF13402ER
411901.BACCAC_01492(PF07470)mitochondrial; (mitochondrial)
411901.BACCAC_01491PF10022ER
411901.BACCAC_02918PF17170ER
411901.BACCAC_02917PF17170ER
411901.BACCAC_00049(PF00722)ER
411901.BACCAC_00997(PF03051)ER
411901.BACCAC_01555(PF03275)(ER)
411901.BACCAC_02593(PF03415)ER
411901.BACCAC_02590PF12812ER
411901.BACCAC_00294PF13905ER
411901.BACCAC_02584(PF14684)ER
411901.BACCAC_03194(PF14684)ER
411901.BACCAC_00618PF13905ER
411901.BACCAC_00503PF13905ER
411901.BACCAC_00061PF16116ER
411901.BACCAC_02808(PF01301)ER
411901.BACCAC_01918(PF01833)ER
411901.BACCAC_02117(PF07940)ER
411901.BACCAC_02116(PF07940)ER
411901.BACCAC_02115(PF07470)ER
411901.BACCAC_02114(PF13320)ER
411901.BACCAC_00084(PF01120)ER
411901.BACCAC_03210(PF01120)ER
411901.BACCAC_00075PF16116ER
411901.BACCAC_00072(PF07168)ER
411901.BACCAC_01858(PF00754)ER
411901.BACCAC_03717(PF00722)ER
411901.BACCAC_00302(PF00722)ER
411901.BACCAC_02863(PF05140)ER
411901.BACCAC_01840PF13402ER
411901.BACCAC_01842(PF00754)ER
411901.BACCAC_03239PF10022ER
411901.BACCAC_03238(PF00722)ER
411901.BACCAC_03237(PF00722)ER
411901.BACCAC_03236(PF00754)ER
411901.BACCAC_01444(PF11028)ER
411901.BACCAC_00335PF14771ER
411901.BACCAC_00334PF14771ER
411901.BACCAC_00252(PF01833)ER
411901.BACCAC_02449(PF05140)ER
411901.BACCAC_00787(PF05970) PF02689
411901.BACCAC_00687(PF00216)(plastid)
411901.BACCAC_03066(PF02357)(mitochondrial)
411901.BACCAC_01246(PF00754) PF13402
411901.BACCAC_01335(PF07470)(mitochondrial)
411901.BACCAC_01293(PF00216)(plastid)
411901.BACCAC_03619(PF14388)(mitochondrial)
411901.BACCAC_01766(PF05970) PF02689
411901.BACCAC_03911(PF03796) (PF00772)
411901.BACCAC_00171(PF13320)(plastid)
411901.BACCAC_01970PF16116(mitochondrial)
411901.BACCAC_01948(PF12437)(mitochondrial)
411901.BACCAC_03389(PF02838) (PF00728)
411901.BACCAC_01803(PF01715)plastid
411901.BACCAC_03778PF03727 PF00349
411901.BACCAC_02358(PF03796) (PF00772)
411901.BACCAC_00512(PF11028)(ER)
411901.BACCAC_00462PF03414(mitochondrial)
411901.BACCAC_00472(PF03796) (PF00772)
411901.BACCAC_00886(PF03796) (PF00772)
411901.BACCAC_01217(PF00216)(plastid)
411901.BACCAC_00899(PF13148) (PF08707)
411901.BACCAC_02656PF17170(ER)
411901.BACCAC_02462(PF06250)
411901.BACCAC_01881(PF00958)
411901.BACCAC_01086(PF00703)
411901.BACCAC_03109PF07959
411901.BACCAC_02672(PF00216)
411901.BACCAC_00232(PF05192)
411901.BACCAC_01321(PF05192)
411901.BACCAC_00128(PF06250)
411901.BACCAC_00129(PF06250)
411901.BACCAC_00116(PF05192)
411901.BACCAC_01521(PF16011)
411901.BACCAC_01741(PF13086)
411901.BACCAC_01243(PF13364)
411901.BACCAC_01240PF13905
411901.BACCAC_03053(PF00216)
411901.BACCAC_03052(PF06250)
411901.BACCAC_02058(PF00112)
411901.BACCAC_00744(PF00216)
411901.BACCAC_00584(PF01120)
411901.BACCAC_03928(PF00216)
411901.BACCAC_02898(PF00754)
411901.BACCAC_03912(PF00216)
411901.BACCAC_01282(PF00216)
411901.BACCAC_02531(PF02357)
411901.BACCAC_02555(PF13148)
411901.BACCAC_00371(PF05693)
411901.BACCAC_00836PF17170
411901.BACCAC_00768(PF04383)
411901.BACCAC_02544(PF01531)
411901.BACCAC_00542(PF00216)
411901.BACCAC_02154(PF06250)
411901.BACCAC_02574PF13402
411901.BACCAC_00716(PF02357)
411901.BACCAC_00140(PF13148)
411901.BACCAC_02967(PF16314)
411901.BACCAC_01920PF10022
411901.BACCAC_03390(PF00216)
411901.BACCAC_00852PF17170
411901.BACCAC_01542(PF03054)
411901.BACCAC_02568(PF09295)
411901.BACCAC_00701(PF03275)
411901.BACCAC_02367(PF00216)
411901.BACCAC_01497(PF07940)
411901.BACCAC_01495PF13402
411901.BACCAC_00453(PF02357)
411901.BACCAC_00044(PF00216)
411901.BACCAC_03417(PF03054)
411901.BACCAC_00190(PF02357)
411901.BACCAC_02170(PF03054)
411901.BACCAC_02357(PF00216)
411901.BACCAC_00463(PF01531)
411901.BACCAC_02613(PF00958)
411901.BACCAC_00543(PF00216)
411901.BACCAC_01585(PF00216)
411901.BACCAC_01914(PF01715)
411901.BACCAC_01919PF10022
411901.BACCAC_00074PF16116
411901.BACCAC_03208PF16269
411901.BACCAC_01204(PF04383)
411901.BACCAC_01849(PF00754)
411901.BACCAC_01662(PF08707)
411901.BACCAC_00251(PF01833)
411901.BACCAC_00921(PF02357)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: YES (FDR = 0.5 %)
  • Functional Type III secretion system: NO (FDR = 12.5 %)
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: NO (FDR = 7.7 %)

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================