Effective results for Streptomyces scabiei 87.22 (eggnog40)
Summary
Number of putative secreted proteins: 644
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 88 eukaryotic-like domains, contained in 644 proteins (51 high, 593 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None
Protein based results
Putative secreted proteins (weak evidence indicated by parentheses)
| Protein | EffectiveT3 | EffectiveCCBD | T4SEpre | EffectiveELD | Predotar |
|---|---|---|---|---|---|
| 680198.SCAB_36371 | (PF00331) (PF00553) | ER | |||
| 680198.SCAB_74271 | (PF08022) (PF01794) | (mitochondrial) | |||
| 680198.SCAB_19491 | (PF01419) (PF03372) | mitochondrial | |||
| 680198.SCAB_90101 | (PF00553) (PF01341) | ER | |||
| 680198.SCAB_17001 | (PF00553) (PF01341) | ER | |||
| 680198.SCAB_0651 | (PF13472) (PF00652) | (mitochondrial) | |||
| 680198.SCAB_43661 | (PF14587) PF14200 | mitochondrial | |||
| 680198.SCAB_5691 | (PF13185) (PF07228) | ER | |||
| 680198.SCAB_82031 | (PF13472) (PF00553) | ER | |||
| 680198.SCAB_79241 | (PF03664) PF14200 | mitochondrial | |||
| 680198.SCAB_78881 | (PF00150) (PF00553) | ER | |||
| 680198.SCAB_22951 | (PF13472) (PF00652) | ER | |||
| 680198.SCAB_79561 | (PF00150) (PF00652) | ER | |||
| 680198.SCAB_5981 | (PF01670) (PF00553) | (mitochondrial) | |||
| 680198.SCAB_51081 | (PF00150) (PF00553) | ER | |||
| 680198.SCAB_22931 | (PF03664) (PF00652) | mitochondrial | |||
| 680198.SCAB_81841 | (PF05592) (PF08531) | (mitochondrial) | |||
| 680198.SCAB_5821 | (PF08022) (PF01794) | ER | |||
| 680198.SCAB_3881 | (PF03664) (PF00652) | ER | |||
| 680198.SCAB_70521 | (PF01095) (PF00544) | (mitochondrial) | |||
| 680198.SCAB_85891 | (PF13185) (PF07228) | (mitochondrial); (plastid) | |||
| 680198.SCAB_58571 | (PF13560) (PF00931) | (mitochondrial) | |||
| 680198.SCAB_7761 | (PF13185) (PF07228) | mitochondrial | |||
| 680198.SCAB_8601 | (PF13185) (PF07228) | (mitochondrial) | |||
| 680198.SCAB_90081 | (PF01670) (PF00553) | ER | |||
| 680198.SCAB_29331 | (PF01580) | ER | |||
| 680198.SCAB_35111 | (PF13565) | (mitochondrial) | |||
| 680198.SCAB_1101 | (PF00150) | ER | |||
| 680198.SCAB_58451 | (PF00652) | (mitochondrial) | |||
| 680198.SCAB_79571 | PF14200 | (mitochondrial) | |||
| 680198.SCAB_76101 | (PF08376) | (mitochondrial) | |||
| 680198.SCAB_28731 | (PF00553) | mitochondrial; (mitochondrial) | |||
| 680198.SCAB_10151 | PF05270 | ER | |||
| 680198.SCAB_40101 | (PF00931) | (ER) | |||
| 680198.SCAB_79831 | (PF01510) | ER | |||
| 680198.SCAB_84971 | (PF01510) | ER | |||
| 680198.SCAB_58141 | PF01839 | ER | |||
| 680198.SCAB_16431 | (PF01341) | ER | |||
| 680198.SCAB_25121 | (PF01580) | ER | |||
| 680198.SCAB_66021 | PF14200 | ER | |||
| 680198.SCAB_29171 | (PF13560) | (mitochondrial) | |||
| 680198.SCAB_80071 | (PF12222) | ER | |||
| 680198.SCAB_58161 | (PF14378) | ER | |||
| 680198.SCAB_90491 | (PF08386) | ER | |||
| 680198.SCAB_35351 | PF01839 | ER | |||
| 680198.SCAB_18151 | (PF03372) | (mitochondrial) | |||
| 680198.SCAB_21081 | (PF00553) | ER | |||
| 680198.SCAB_87971 | (PF13560) | (mitochondrial) | |||
| 680198.SCAB_3871 | PF14200 | (mitochondrial); mitochondrial | |||
| 680198.SCAB_66031 | PF05270 | ER | |||
| 680198.SCAB_6861 | (PF14759) | (ER); (mitochondrial) | |||
| 680198.SCAB_52431 | (PF13560) | mitochondrial | |||
| 680198.SCAB_53501 | (PF01580) | ER | |||
| 680198.SCAB_17021 | (PF00553) | ER | |||
| 680198.SCAB_11391 | (PF01794) | ER | |||
| 680198.SCAB_86271 | (PF00150) | (mitochondrial) | |||
| 680198.SCAB_42601 | PF01839 | ER | |||
| 680198.SCAB_10171 | PF05270 | ER | |||
| 680198.SCAB_44251 | (PF13560) | (mitochondrial); plastid | |||
| 680198.SCAB_42591 | PF01839 | ER; (ER) | |||
| 680198.SCAB_70571 | (PF01095) | (ER); ER | |||
| 680198.SCAB_86471 | (PF00150) | mitochondrial | |||
| 680198.SCAB_65301 | (PF14378) | (ER) | |||
| 680198.SCAB_89621 | (PF07228) | ER | |||
| 680198.SCAB_7061 | (PF14759) | (mitochondrial) | |||
| 680198.SCAB_12241 | (PF03995) | ER | |||
| 680198.SCAB_79381 | (PF00652) | mitochondrial | |||
| 680198.SCAB_35411 | (PF13565) | (mitochondrial); plastid | |||
| 680198.SCAB_44311 | (PF00652) | ER | |||
| 680198.SCAB_9381 | (PF15892) | ER | |||
| 680198.SCAB_17081 | (PF13560) | (mitochondrial) | |||
| 680198.SCAB_77321 | (PF00331) | ER | |||
| 680198.SCAB_29381 | (PF13560) | mitochondrial | |||
| 680198.SCAB_0631 | PF14200 | (ER) | |||
| 680198.SCAB_28161 | (PF00931) | mitochondrial | |||
| 680198.SCAB_3851 | PF14200 | mitochondrial | |||
| 680198.SCAB_16521 | PF05270 | ER | |||
| 680198.SCAB_4501 | PF14200 | mitochondrial | |||
| 680198.SCAB_3701 | PF01839 | ER | |||
| 680198.SCAB_19551 | PF14686 (PF14683) PF09284 | ||||
| 680198.SCAB_79261 | PF14200 | (mitochondrial) | |||
| 680198.SCAB_6021 | (PF00331) | ER | |||
| 680198.SCAB_79401 | (PF00652) | ER | |||
| 680198.SCAB_58741 | (PF13560) | (mitochondrial) | |||
| 680198.SCAB_38621 | (PF08386) | ER | |||
| 680198.SCAB_1751 | (PF03995) | ER | |||
| 680198.SCAB_79421 | PF14200 | (ER); (plastid) | |||
| 680198.SCAB_58481 | (PF13560) | (mitochondrial) | |||
| 680198.SCAB_65771 | (PF09369) | (mitochondrial) | |||
| 680198.SCAB_82691 | (PF03372) | ER | |||
| 680198.SCAB_69261 | (PF13560) | mitochondrial; (mitochondrial) | |||
| 680198.SCAB_49151 | (PF07228) | (mitochondrial) | |||
| 680198.SCAB_89541 | (PF01494) | (ER) | |||
| 680198.SCAB_86311 | (PF00150) | ER | |||
| 680198.SCAB_6471 | PF14200 | mitochondrial | |||
| 680198.SCAB_34031 | (PF13768) | mitochondrial | |||
| 680198.SCAB_54581 | (PF13472) | mitochondrial | |||
| 680198.SCAB_90091 | (PF00553) | ER | |||
| 680198.SCAB_90671 | (PF01494) | ER; (ER) | |||
| 680198.SCAB_66761 | (PF09362) | ER; (ER) | |||
| 680198.SCAB_83011 | (PF08386) | ER | |||
| 680198.SCAB_87261 | (PF03372) | (ER) | |||
| 680198.SCAB_41911 | (PF03995) | ER | |||
| 680198.SCAB_79481 | (PF00652) | mitochondrial | |||
| 680198.SCAB_79011 | (PF13472) | (mitochondrial); (ER) | |||
| 680198.SCAB_34211 | (PF07250) | mitochondrial | |||
| 680198.SCAB_38561 | (PF12721) | ER | |||
| 680198.SCAB_58621 | (PF01580) | (mitochondrial) | |||
| 680198.SCAB_6371 | PF01839 | ER | |||
| 680198.SCAB_85551 | PF01839 | ER | |||
| 680198.SCAB_16301 | (PF02945) | (mitochondrial); plastid | |||
| 680198.SCAB_78801 | (PF08376) | ER | |||
| 680198.SCAB_84491 | (PF13535) | (ER) | |||
| 680198.SCAB_39941 | (PF13560) | mitochondrial | |||
| 680198.SCAB_52121 | (PF03372) | (mitochondrial) | |||
| 680198.SCAB_74031 | (PF07228) | (ER) | |||
| 680198.SCAB_3671 | PF14200 | (ER) | |||
| 680198.SCAB_25071 | (PF13560) | mitochondrial | |||
| 680198.SCAB_44901 | (PF00544) | (mitochondrial) | |||
| 680198.SCAB_57081 | (PF13560) | (mitochondrial) | |||
| 680198.SCAB_43901 | (PF08386) | (mitochondrial) | |||
| 680198.SCAB_55021 | (PF01510) | mitochondrial | |||
| 680198.SCAB_37051 | (PF00331) | ER | |||
| 680198.SCAB_9591 | PF14200 | (mitochondrial) | |||
| 680198.SCAB_24591 | (PF03747) | (ER) | |||
| 680198.SCAB_82441 | (PF00553) | ER | |||
| 680198.SCAB_10161 | PF05270 | mitochondrial | |||
| 680198.SCAB_70251 | (PF03372) | (mitochondrial) | |||
| 680198.SCAB_16421 | (PF13377) | (mitochondrial) | |||
| 680198.SCAB_66991 | (PF01510) | ER | |||
| 680198.SCAB_17011 | (PF00553) | ER | |||
| 680198.SCAB_19941 | PF05270 | ER | |||
| 680198.SCAB_49011 | (PF07228) | (mitochondrial) | |||
| 680198.SCAB_24921 | (PF01494) | ER | |||
| 680198.SCAB_11121 | (PF01494) | (ER) | |||
| 680198.SCAB_78741 | (PF13653) | mitochondrial | |||
| 680198.SCAB_44731 | (PF07228) | (mitochondrial) | |||
| 680198.SCAB_64111 | (PF13472) | ER | |||
| 680198.SCAB_17031 | (PF03372) | (ER) | |||
| 680198.SCAB_51041 | (PF13472) | (mitochondrial) | |||
| 680198.SCAB_70561 | (PF01095) | mitochondrial; (mitochondrial) | |||
| 680198.SCAB_30811 | (PF08386) | ER | |||
| 680198.SCAB_42611 | PF01839 | ER | |||
| 680198.SCAB_42581 | PF01839 | (ER) | |||
| 680198.SCAB_82451 | (PF13472) | ER | |||
| 680198.SCAB_0911 | (PF06241) | (ER); ER | |||
| 680198.SCAB_70541 | (PF13472) | mitochondrial; (mitochondrial) | |||
| 680198.SCAB_2361 | (PF13560) | (mitochondrial) | |||
| 680198.SCAB_79391 | (PF00652) | (ER) | |||
| 680198.SCAB_42631 | PF01839 | mitochondrial | |||
| 680198.SCAB_48091 | (PF01510) | mitochondrial; (mitochondrial) | |||
| 680198.SCAB_63411 | (PF00931) | (mitochondrial) | |||
| 680198.SCAB_53021 | (PF06772) | ER | |||
| 680198.SCAB_84101 | (PF00931) | (ER); ER | |||
| 680198.SCAB_77441 | PF14200 | (ER); ER | |||
| 680198.SCAB_10061 | PF03068 | ER | |||
| 680198.SCAB_52721 | (PF13560) | (mitochondrial) | |||
| 680198.SCAB_72401 | (PF13472) | ER | |||
| 680198.SCAB_0601 | (PF15892) | ER | |||
| 680198.SCAB_71471 | (PF13185) | ER | |||
| 680198.SCAB_88501 | PF14686 (PF14683) PF09284 | ||||
| 680198.SCAB_19541 | (PF13472) | (ER) | |||
| 680198.SCAB_2591 | PF01839 | (ER) | |||
| 680198.SCAB_79411 | (PF00652) | mitochondrial | |||
| 680198.SCAB_8371 | (PF01494) | ER | |||
| 680198.SCAB_2901 | PF00161 | ER | |||
| 680198.SCAB_19561 | (PF00652) | ER | |||
| 680198.SCAB_3891 | (PF00652) | mitochondrial; ER | |||
| 680198.SCAB_78781 | (PF01095) | (ER) | |||
| 680198.SCAB_63021 | (PF00931) | mitochondrial; (mitochondrial) | |||
| 680198.SCAB_79131 | (PF07228) | (mitochondrial) | |||
| 680198.SCAB_0431 | (PF13472) | ER | |||
| 680198.SCAB_44831 | (PF10138) | mitochondrial; (mitochondrial) | |||
| 680198.SCAB_3201 | PF01839 | ER | |||
| 680198.SCAB_12291 | (PF00931) (PF13676) | ||||
| 680198.SCAB_77501 | (PF16353) (PF02929) | ||||
| 680198.SCAB_71901 | (PF03747) | (mitochondrial) | |||
| 680198.SCAB_87221 | (PF13565) | (mitochondrial) | |||
| 680198.SCAB_25161 | (PF13185) (PF07228) | ||||
| 680198.SCAB_84511 | (PF04183) (PF06276) | ||||
| 680198.SCAB_23621 | (PF01494) | (ER) | |||
| 680198.SCAB_13501 | (PF13560) | (mitochondrial) | |||
| 680198.SCAB_9371 | (PF13377) | plastid | |||
| 680198.SCAB_46351 | (PF10138) (PF02342) | ||||
| 680198.SCAB_20091 | (PF01636) | (plastid) | |||
| 680198.SCAB_86711 | (PF05592) (PF08531) | ||||
| 680198.SCAB_87091 | (PF13185) (PF07228) | ||||
| 680198.SCAB_84501 | (PF04183) (PF06276) | ||||
| 680198.SCAB_84981 | (PF01636) | plastid | |||
| 680198.SCAB_5111 | (PF09362) | (ER) | |||
| 680198.SCAB_8561 | (PF00150) | (mitochondrial) | |||
| 680198.SCAB_25511 | (PF13377) | plastid | |||
| 680198.SCAB_43931 | (PF13185) (PF07228) | ||||
| 680198.SCAB_21511 | (PF01636) | (plastid) | |||
| 680198.SCAB_85701 | (PF01494) | (ER) | |||
| 680198.SCAB_57051 | (PF13560) | plastid | |||
| 680198.SCAB_45001 | (PF13185) (PF07228) | ||||
| 680198.SCAB_48061 | (PF13560) | (plastid) | |||
| 680198.SCAB_22911 | (PF06101) | plastid | |||
| 680198.SCAB_46831 | (PF13565) | (plastid) | |||
| 680198.SCAB_19471 | (PF16353) (PF02929) | ||||
| 680198.SCAB_58371 | (PF13377) | (plastid) | |||
| 680198.SCAB_0241 | (PF08007) | ER | |||
| 680198.SCAB_82021 | (PF00150) (PF00553) | ||||
| 680198.SCAB_8651 | (PF13185) (PF07228) | ||||
| 680198.SCAB_90021 | (PF01609) | (plastid) | |||
| 680198.SCAB_70101 | PF05270 | (mitochondrial) | |||
| 680198.SCAB_11781 | (PF06276) | (ER) | |||
| 680198.SCAB_61351 | (PF13560) | (mitochondrial) | |||
| 680198.SCAB_8231 | (PF07228) | (ER) | |||
| 680198.SCAB_85841 | (PF13560) | (mitochondrial) | |||
| 680198.SCAB_81961 | (PF13535) | (plastid) | |||
| 680198.SCAB_57271 | (PF01341) | (mitochondrial) | |||
| 680198.SCAB_18391 | (PF04183) (PF06276) | ||||
| 680198.SCAB_11321 | (PF14759) | (ER) | |||
| 680198.SCAB_77301 | (PF13377) | (plastid) | |||
| 680198.SCAB_18401 | (PF04183) (PF06276) | ||||
| 680198.SCAB_0811 | (PF07228) | (mitochondrial) | |||
| 680198.SCAB_22771 | (PF05592) (PF08531) | ||||
| 680198.SCAB_11131 | (PF13377) | plastid | |||
| 680198.SCAB_44201 | (PF16353) (PF02929) | ||||
| 680198.SCAB_86561 | (PF05592) (PF08531) | ||||
| 680198.SCAB_17751 | (PF08242) | (mitochondrial) | |||
| 680198.SCAB_11661 | (PF13185) (PF07228) | ||||
| 680198.SCAB_78261 | (PF13560) | (mitochondrial) | |||
| 680198.SCAB_55761 | (PF13377) | (plastid) | |||
| 680198.SCAB_46671 | (PF00931) (PF13676) | ||||
| 680198.SCAB_53211 | (PF03372) | (mitochondrial) | |||
| 680198.SCAB_82781 | (PF01494) | (ER) | |||
| 680198.SCAB_86701 | (PF05592) (PF08531) | ||||
| 680198.SCAB_40871 | (PF09369) | (plastid) | |||
| 680198.SCAB_24681 | (PF04183) (PF06276) | ||||
| 680198.SCAB_36991 | (PF04928) (PF03372) | ||||
| 680198.SCAB_18941 | (PF13185) (PF07228) | ||||
| 680198.SCAB_17531 | (PF13185) (PF07228) | ||||
| 680198.SCAB_15561 | (PF16353) (PF02929) | ||||
| 680198.SCAB_58531 | PF06597 | (mitochondrial) | |||
| 680198.SCAB_32151 | (PF03372) | (mitochondrial) | |||
| 680198.SCAB_19631 | (PF13377) | (mitochondrial) | |||
| 680198.SCAB_87841 | (PF01494) | (ER) | |||
| 680198.SCAB_7541 | (PF13185) (PF07228) | ||||
| 680198.SCAB_16411 | (PF13185) (PF07228) | ||||
| 680198.SCAB_44321 | PF05270 | (ER) | |||
| 680198.SCAB_12301 | (PF13676) | (mitochondrial) | |||
| 680198.SCAB_16071 | (PF09369) | (plastid) | |||
| 680198.SCAB_57961 | (PF13565) | (mitochondrial) | |||
| 680198.SCAB_78451 | (PF13185) (PF07228) | ||||
| 680198.SCAB_18981 | (PF00931) (PF13676) | ||||
| 680198.SCAB_9681 | (PF14759) | (mitochondrial) | |||
| 680198.SCAB_31641 | (PF13185) (PF07228) | ||||
| 680198.SCAB_84801 | (PF00652) | (mitochondrial) | |||
| 680198.SCAB_16241 | (PF13560) | plastid | |||
| 680198.SCAB_78891 | (PF14587) PF14200 | ||||
| 680198.SCAB_79251 | (PF00331) (PF00652) | ||||
| 680198.SCAB_59871 | (PF13565) | (mitochondrial) | |||
| 680198.SCAB_57921 | (PF04183) (PF06276) | ||||
| 680198.SCAB_84791 | (PF05592) (PF08531) | ||||
| 680198.SCAB_5751 | (PF13560) | ||||
| 680198.SCAB_71591 | (PF02245) | ||||
| 680198.SCAB_90201 | (PF01494) | ||||
| 680198.SCAB_76901 | (PF13377) | ||||
| 680198.SCAB_61501 | (PF07228) | ||||
| 680198.SCAB_89081 | (PF05731) | ||||
| 680198.SCAB_13291 | (PF13377) | ||||
| 680198.SCAB_84651 | (PF02148) | ||||
| 680198.SCAB_7311 | (PF13377) | ||||
| 680198.SCAB_85301 | (PF13560) | ||||
| 680198.SCAB_14951 | (PF03055) | ||||
| 680198.SCAB_52621 | (PF07228) | ||||
| 680198.SCAB_43561 | (PF13245) | ||||
| 680198.SCAB_83231 | (PF07728) | ||||
| 680198.SCAB_72841 | (PF01636) | ||||
| 680198.SCAB_42901 | (PF01609) | ||||
| 680198.SCAB_73711 | (PF03029) | ||||
| 680198.SCAB_21251 | (PF09369) | ||||
| 680198.SCAB_33591 | (PF07228) | ||||
| 680198.SCAB_56191 | (PF01580) | ||||
| 680198.SCAB_87071 | (PF13185) | ||||
| 680198.SCAB_12711 | (PF03029) | ||||
| 680198.SCAB_20501 | (PF01494) | ||||
| 680198.SCAB_54741 | (PF00652) | ||||
| 680198.SCAB_27311 | (PF01510) | ||||
| 680198.SCAB_20421 | (PF13560) | ||||
| 680198.SCAB_55651 | (PF01580) | ||||
| 680198.SCAB_15001 | (PF01494) | ||||
| 680198.SCAB_22041 | (PF13535) | ||||
| 680198.SCAB_44411 | (PF01609) | ||||
| 680198.SCAB_48871 | (PF06772) | ||||
| 680198.SCAB_68561 | (PF03747) | ||||
| 680198.SCAB_19101 | (PF13377) | ||||
| 680198.SCAB_12731 | (PF03259) | ||||
| 680198.SCAB_7601 | (PF01609) | ||||
| 680198.SCAB_69571 | (PF13560) | ||||
| 680198.SCAB_63941 | (PF13377) | ||||
| 680198.SCAB_50711 | (PF13245) | ||||
| 680198.SCAB_20521 | (PF00931) | ||||
| 680198.SCAB_22741 | (PF13472) | ||||
| 680198.SCAB_88641 | (PF13560) | ||||
| 680198.SCAB_36331 | (PF09445) | ||||
| 680198.SCAB_80641 | (PF07228) | ||||
| 680198.SCAB_21591 | (PF01636) | ||||
| 680198.SCAB_78811 | (PF03259) | ||||
| 680198.SCAB_11921 | (PF13535) | ||||
| 680198.SCAB_27291 | (PF08242) | ||||
| 680198.SCAB_53701 | (PF01580) | ||||
| 680198.SCAB_50171 | (PF13560) | ||||
| 680198.SCAB_4671 | (PF03259) | ||||
| 680198.SCAB_35101 | (PF01494) | ||||
| 680198.SCAB_0391 | (PF01609) | ||||
| 680198.SCAB_85941 | (PF07228) | ||||
| 680198.SCAB_18861 | (PF07786) | ||||
| 680198.SCAB_1471 | (PF08242) | ||||
| 680198.SCAB_78831 | (PF03029) | ||||
| 680198.SCAB_20391 | (PF03029) | ||||
| 680198.SCAB_57761 | (PF13377) | ||||
| 680198.SCAB_67761 | (PF14759) | ||||
| 680198.SCAB_29701 | (PF08376) | ||||
| 680198.SCAB_76691 | (PF07931) | ||||
| 680198.SCAB_85001 | (PF07228) | ||||
| 680198.SCAB_79181 | (PF03259) | ||||
| 680198.SCAB_5831 | (PF13377) | ||||
| 680198.SCAB_30081 | (PF02148) | ||||
| 680198.SCAB_40561 | (PF02784) | ||||
| 680198.SCAB_6111 | (PF13472) | ||||
| 680198.SCAB_86591 | (PF13377) | ||||
| 680198.SCAB_80291 | (PF00931) | ||||
| 680198.SCAB_90571 | (PF01494) | ||||
| 680198.SCAB_73791 | (PF13560) | ||||
| 680198.SCAB_78071 | (PF01494) | ||||
| 680198.SCAB_63271 | (PF02784) | ||||
| 680198.SCAB_13521 | (PF13377) | ||||
| 680198.SCAB_19371 | (PF00553) | ||||
| 680198.SCAB_64371 | (PF02342) | ||||
| 680198.SCAB_85901 | (PF07228) | ||||
| 680198.SCAB_8891 | (PF07228) | ||||
| 680198.SCAB_80191 | (PF02342) | ||||
| 680198.SCAB_88881 | (PF01636) | ||||
| 680198.SCAB_2831 | (PF07786) | ||||
| 680198.SCAB_65081 | (PF01510) | ||||
| 680198.SCAB_86021 | (PF07228) | ||||
| 680198.SCAB_13661 | (PF08386) | ||||
| 680198.SCAB_27581 | (PF00652) | ||||
| 680198.SCAB_78091 | (PF13472) | ||||
| 680198.SCAB_32621 | (PF13535) | ||||
| 680198.SCAB_83451 | (PF13377) | ||||
| 680198.SCAB_44531 | (PF07228) | ||||
| 680198.SCAB_14111 | (PF01494) | ||||
| 680198.SCAB_2811 | (PF07786) | ||||
| 680198.SCAB_16121 | (PF09369) | ||||
| 680198.SCAB_68581 | (PF03747) | ||||
| 680198.SCAB_69451 | (PF02342) | ||||
| 680198.SCAB_81661 | (PF02342) | ||||
| 680198.SCAB_80941 | (PF07228) | ||||
| 680198.SCAB_66571 | (PF13377) | ||||
| 680198.SCAB_38931 | (PF13676) | ||||
| 680198.SCAB_3441 | (PF01636) | ||||
| 680198.SCAB_80971 | (PF01636) | ||||
| 680198.SCAB_2311 | (PF13560) | ||||
| 680198.SCAB_19951 | PF05270 | ||||
| 680198.SCAB_5321 | (PF13377) | ||||
| 680198.SCAB_2171 | (PF14759) | ||||
| 680198.SCAB_1371 | (PF00931) | ||||
| 680198.SCAB_10281 | (PF13560) | ||||
| 680198.SCAB_64331 | (PF02342) | ||||
| 680198.SCAB_63421 | (PF13676) | ||||
| 680198.SCAB_77331 | (PF13377) | ||||
| 680198.SCAB_6771 | (PF07786) | ||||
| 680198.SCAB_32091 | (PF03259) | ||||
| 680198.SCAB_87311 | (PF01636) | ||||
| 680198.SCAB_65511 | (PF02342) | ||||
| 680198.SCAB_14731 | (PF03055) | ||||
| 680198.SCAB_16391 | (PF13245) | ||||
| 680198.SCAB_86061 | (PF01494) | ||||
| 680198.SCAB_75481 | (PF03372) | ||||
| 680198.SCAB_36981 | (PF09414) | ||||
| 680198.SCAB_10131 | PF14200 | ||||
| 680198.SCAB_88101 | (PF14124) | ||||
| 680198.SCAB_87811 | (PF01494) | ||||
| 680198.SCAB_16491 | (PF13560) | ||||
| 680198.SCAB_70281 | (PF05731) | ||||
| 680198.SCAB_2371 | (PF13560) | ||||
| 680198.SCAB_11861 | (PF13535) | ||||
| 680198.SCAB_5961 | (PF07228) | ||||
| 680198.SCAB_26771 | (PF03029) | ||||
| 680198.SCAB_79951 | (PF08376) | ||||
| 680198.SCAB_77081 | (PF13560) | ||||
| 680198.SCAB_88861 | (PF01494) | ||||
| 680198.SCAB_56851 | (PF13472) | ||||
| 680198.SCAB_4481 | (PF01609) | ||||
| 680198.SCAB_51941 | (PF00931) | ||||
| 680198.SCAB_46901 | (PF01580) | ||||
| 680198.SCAB_3371 | (PF01609) | ||||
| 680198.SCAB_26691 | (PF08376) | ||||
| 680198.SCAB_42811 | (PF01609) | ||||
| 680198.SCAB_4651 | (PF03029) | ||||
| 680198.SCAB_21611 | (PF01636) | ||||
| 680198.SCAB_30821 | (PF08386) | ||||
| 680198.SCAB_81981 | (PF07728) | ||||
| 680198.SCAB_25571 | (PF01670) | ||||
| 680198.SCAB_38761 | (PF01636) | ||||
| 680198.SCAB_1291 | PF01839 | ||||
| 680198.SCAB_40231 | (PF13768) | ||||
| 680198.SCAB_36441 | (PF13560) | ||||
| 680198.SCAB_18051 | (PF13560) | ||||
| 680198.SCAB_26701 | (PF03259) | ||||
| 680198.SCAB_20251 | (PF03259) | ||||
| 680198.SCAB_57031 | (PF08007) | ||||
| 680198.SCAB_29951 | (PF13377) | ||||
| 680198.SCAB_8831 | (PF00652) | ||||
| 680198.SCAB_79991 | (PF03259) | ||||
| 680198.SCAB_88751 | (PF01494) | ||||
| 680198.SCAB_2891 | (PF14378) | ||||
| 680198.SCAB_31921 | (PF13560) | ||||
| 680198.SCAB_62481 | (PF14759) | ||||
| 680198.SCAB_61901 | (PF00931) | ||||
| 680198.SCAB_26831 | (PF01636) | ||||
| 680198.SCAB_90821 | (PF01609) | ||||
| 680198.SCAB_1481 | (PF08242) | ||||
| 680198.SCAB_46681 | (PF13676) | ||||
| 680198.SCAB_50501 | (PF13560) | ||||
| 680198.SCAB_88511 | (PF13560) | ||||
| 680198.SCAB_84751 | (PF13377) | ||||
| 680198.SCAB_54691 | (PF02784) | ||||
| 680198.SCAB_28971 | (PF02784) | ||||
| 680198.SCAB_19001 | (PF13676) | ||||
| 680198.SCAB_52221 | (PF03747) | ||||
| 680198.SCAB_43271 | (PF01494) | ||||
| 680198.SCAB_46741 | (PF07228) | ||||
| 680198.SCAB_66561 | (PF14378) | ||||
| 680198.SCAB_63101 | (PF01494) | ||||
| 680198.SCAB_20281 | (PF01609) | not used | |||
| 680198.SCAB_38991 | (PF01636) | ||||
| 680198.SCAB_70311 | (PF02342) | ||||
| 680198.SCAB_34431 | (PF13560) | ||||
| 680198.SCAB_79091 | (PF07228) | ||||
| 680198.SCAB_65381 | (PF01636) | ||||
| 680198.SCAB_53031 | (PF06772) | ||||
| 680198.SCAB_40581 | (PF01636) | ||||
| 680198.SCAB_16371 | (PF07728) | ||||
| 680198.SCAB_73491 | (PF13377) | ||||
| 680198.SCAB_26751 | (PF03259) | ||||
| 680198.SCAB_2631 | (PF01494) | ||||
| 680198.SCAB_44651 | (PF13560) | ||||
| 680198.SCAB_66851 | (PF01636) | ||||
| 680198.SCAB_35001 | (PF06772) | ||||
| 680198.SCAB_38601 | (PF13560) | ||||
| 680198.SCAB_44001 | (PF01186) | ||||
| 680198.SCAB_15261 | PF01231 | ||||
| 680198.SCAB_20321 | (PF03029) | ||||
| 680198.SCAB_41701 | (PF00931) | ||||
| 680198.SCAB_88221 | (PF03372) | ||||
| 680198.SCAB_79221 | (PF11991) | ||||
| 680198.SCAB_4131 | (PF07228) | ||||
| 680198.SCAB_0161 | (PF01609) | not used | |||
| 680198.SCAB_89091 | PF14200 | ||||
| 680198.SCAB_88941 | (PF01494) | ||||
| 680198.SCAB_89891 | (PF13377) | ||||
| 680198.SCAB_3021 | (PF13472) | ||||
| 680198.SCAB_43081 | PF14200 | ||||
| 680198.SCAB_52241 | (PF07931) | ||||
| 680198.SCAB_41491 | (PF13560) | ||||
| 680198.SCAB_25151 | (PF13185) | ||||
| 680198.SCAB_20301 | (PF03259) | ||||
| 680198.SCAB_84741 | PF14200 | ||||
| 680198.SCAB_79201 | (PF03029) | ||||
| 680198.SCAB_30051 | (PF01510) | ||||
| 680198.SCAB_12891 | (PF13560) | ||||
| 680198.SCAB_71581 | (PF02245) | ||||
| 680198.SCAB_86661 | (PF13377) | ||||
| 680198.SCAB_48671 | (PF13560) | ||||
| 680198.SCAB_20511 | (PF00931) | ||||
| 680198.SCAB_10621 | (PF13185) | ||||
| 680198.SCAB_88071 | (PF03664) | ||||
| 680198.SCAB_63311 | (PF01494) | ||||
| 680198.SCAB_53561 | (PF01636) | ||||
| 680198.SCAB_48861 | (PF01494) | ||||
| 680198.SCAB_76111 | (PF03259) | ||||
| 680198.SCAB_68571 | (PF03747) | ||||
| 680198.SCAB_23631 | (PF01494) | ||||
| 680198.SCAB_7111 | (PF07228) | ||||
| 680198.SCAB_11701 | (PF01609) | ||||
| 680198.SCAB_18641 | (PF13185) | ||||
| 680198.SCAB_4171 | (PF13185) | ||||
| 680198.SCAB_28181 | (PF00931) | ||||
| 680198.SCAB_7471 | (PF09511) | ||||
| 680198.SCAB_0691 | (PF01609) | ||||
| 680198.SCAB_49871 | (PF07228) | ||||
| 680198.SCAB_82731 | (PF13377) | ||||
| 680198.SCAB_44791 | (PF03372) | ||||
| 680198.SCAB_90771 | (PF01636) | ||||
| 680198.SCAB_61491 | (PF13185) | ||||
| 680198.SCAB_76131 | (PF03029) | ||||
| 680198.SCAB_89261 | (PF13377) | ||||
| 680198.SCAB_29121 | (PF08007) | ||||
| 680198.SCAB_43681 | (PF13377) | ||||
| 680198.SCAB_12351 | (PF01494) | ||||
| 680198.SCAB_23211 | (PF08242) | ||||
| 680198.SCAB_68181 | (PF01609) | ||||
| 680198.SCAB_22821 | (PF13377) | ||||
| 680198.SCAB_80801 | (PF13185) | ||||
| 680198.SCAB_14651 | (PF03055) | ||||
| 680198.SCAB_2711 | (PF01636) | ||||
| 680198.SCAB_55921 | (PF13245) | ||||
| 680198.SCAB_86541 | (PF13377) | ||||
| 680198.SCAB_20941 | (PF13377) | ||||
| 680198.SCAB_33011 | (PF07728) | ||||
| 680198.SCAB_22841 | (PF03959) | ||||
| 680198.SCAB_30631 | (PF02342) | ||||
| 680198.SCAB_18141 | (PF13472) | ||||
| 680198.SCAB_6291 | (PF07228) | ||||
| 680198.SCAB_62071 | (PF13560) | ||||
| 680198.SCAB_85471 | (PF08242) | ||||
| 680198.SCAB_16321 | (PF07728) | ||||
| 680198.SCAB_35691 | (PF13560) | ||||
| 680198.SCAB_51131 | (PF03259) | ||||
| 680198.SCAB_20381 | (PF03259) | ||||
| 680198.SCAB_48771 | (PF13560) | ||||
| 680198.SCAB_23801 | (PF01609) | ||||
| 680198.SCAB_69631 | (PF08376) | ||||
| 680198.SCAB_67561 | (PF03372) | ||||
| 680198.SCAB_28031 | (PF13245) | ||||
| 680198.SCAB_12141 | (PF01494) | ||||
| 680198.SCAB_72751 | (PF09414) | ||||
| 680198.SCAB_62011 | (PF03372) | ||||
| 680198.SCAB_2821 | (PF13472) | ||||
| 680198.SCAB_58771 | (PF13560) | ||||
| 680198.SCAB_15421 | (PF01494) | ||||
| 680198.SCAB_50261 | (PF02342) | ||||
| 680198.SCAB_24621 | (PF02342) | ||||
| 680198.SCAB_78061 | (PF14216) | ||||
| 680198.SCAB_34191 | (PF01494) | ||||
| 680198.SCAB_21351 | (PF08007) | ||||
| 680198.SCAB_90341 | (PF03055) | ||||
| 680198.SCAB_75951 | (PF13472) | ||||
| 680198.SCAB_48381 | (PF01580) | ||||
| 680198.SCAB_18811 | (PF13377) | ||||
| 680198.SCAB_77781 | (PF07728) | ||||
| 680198.SCAB_29691 | (PF03259) | ||||
| 680198.SCAB_88891 | (PF13377) | ||||
| 680198.SCAB_68591 | (PF03747) | ||||
| 680198.SCAB_56521 | (PF13377) | ||||
| 680198.SCAB_73271 | (PF01636) | ||||
| 680198.SCAB_80791 | (PF13185) | ||||
| 680198.SCAB_17711 | (PF03747) | ||||
| 680198.SCAB_86481 | (PF13377) | ||||
| 680198.SCAB_64341 | (PF02342) | ||||
| 680198.SCAB_36381 | (PF13377) | ||||
| 680198.SCAB_86261 | (PF13185) | ||||
| 680198.SCAB_45011 | (PF01609) | ||||
| 680198.SCAB_84531 | (PF01494) | ||||
| 680198.SCAB_80161 | (PF07228) | ||||
| 680198.SCAB_21521 | (PF13560) | ||||
| 680198.SCAB_80301 | (PF07728) | ||||
| 680198.SCAB_35141 | (PF16095) | ||||
| 680198.SCAB_69441 | (PF02342) | ||||
| 680198.SCAB_32411 | (PF00931) | ||||
| 680198.SCAB_43411 | (PF07228) | ||||
| 680198.SCAB_2301 | (PF13560) | ||||
| 680198.SCAB_21311 | (PF13560) | ||||
| 680198.SCAB_74531 | (PF01636) | ||||
| 680198.SCAB_29011 | (PF13560) | ||||
| 680198.SCAB_52291 | (PF13560) | ||||
| 680198.SCAB_79961 | (PF03259) | ||||
| 680198.SCAB_90071 | (PF13377) | ||||
| 680198.SCAB_3821 | (PF01636) | ||||
| 680198.SCAB_5291 | (PF02784) | ||||
| 680198.SCAB_57541 | (PF13245) | ||||
| 680198.SCAB_80921 | (PF07228) | ||||
| 680198.SCAB_7241 | (PF13377) | ||||
| 680198.SCAB_66421 | (PF03372) | ||||
| 680198.SCAB_4461 | (PF13560) | ||||
| 680198.SCAB_4551 | (PF13377) | ||||
| 680198.SCAB_59891 | (PF07228) | ||||
| 680198.SCAB_25561 | (PF13377) | ||||
| 680198.SCAB_12831 | (PF13472) | ||||
| 680198.SCAB_77461 | (PF13377) | ||||
| 680198.SCAB_29671 | (PF03029) | ||||
| 680198.SCAB_38111 | (PF01494) | ||||
| 680198.SCAB_61301 | (PF01510) | ||||
| 680198.SCAB_8021 | (PF02148) | ||||
| 680198.SCAB_20451 | (PF13377) | ||||
| 680198.SCAB_17071 | (PF13560) | ||||
| 680198.SCAB_0641 | PF14200 | not used | |||
| 680198.SCAB_20231 | (PF03029) | ||||
| 680198.SCAB_79151 | (PF09265) | ||||
| 680198.SCAB_2431 | (PF13377) | ||||
| 680198.SCAB_6391 | (PF00652) | ||||
| 680198.SCAB_82421 | (PF00544) | ||||
| 680198.SCAB_9251 | (PF01636) | ||||
| 680198.SCAB_71611 | (PF02245) | ||||
| 680198.SCAB_61791 | PF03068 | ||||
| 680198.SCAB_62801 | (PF07786) | ||||
| 680198.SCAB_16471 | (PF13560) | ||||
| 680198.SCAB_57571 | (PF14378) | ||||
| 680198.SCAB_59371 | (PF13768) | ||||
| 680198.SCAB_90441 | (PF01494) | ||||
| 680198.SCAB_58511 | PF06597 | ||||
| 680198.SCAB_10841 | (PF01794) | ||||
| 680198.SCAB_49791 | (PF13245) | ||||
| 680198.SCAB_76641 | (PF14124) | ||||
| 680198.SCAB_83261 | (PF07228) | ||||
| 680198.SCAB_79981 | (PF03029) | ||||
| 680198.SCAB_23571 | (PF01494) | ||||
| 680198.SCAB_81381 | (PF07786) | ||||
| 680198.SCAB_54661 | (PF03259) | ||||
| 680198.SCAB_68641 | (PF10138) | ||||
| 680198.SCAB_86111 | (PF02784) | ||||
| 680198.SCAB_40691 | (PF13245) | ||||
| 680198.SCAB_23721 | (PF01609) | ||||
| 680198.SCAB_44051 | (PF02342) | ||||
| 680198.SCAB_30321 | (PF03259) | ||||
| 680198.SCAB_7741 | (PF09362) | ||||
| 680198.SCAB_26721 | (PF03029) | ||||
| 680198.SCAB_32111 | (PF03029) | ||||
| 680198.SCAB_0991 | (PF01609) | ||||
| 680198.SCAB_10801 | (PF01609) | ||||
| 680198.SCAB_1021 | (PF01494) | ||||
| 680198.SCAB_0371 | (PF01609) | ||||
| 680198.SCAB_66711 | (PF07228) | ||||
| 680198.SCAB_70551 | (PF00544) | ||||
| 680198.SCAB_77151 | (PF14759) | ||||
| 680198.SCAB_19971 | (PF01636) | ||||
| 680198.SCAB_65891 | (PF13560) | ||||
| 680198.SCAB_6261 | (PF07228) | ||||
| 680198.SCAB_83061 | (PF02342) | ||||
| 680198.SCAB_65761 | (PF13245) | ||||
| 680198.SCAB_15031 | (PF03055) | ||||
| 680198.SCAB_34281 | (PF00931) | ||||
| 680198.SCAB_39011 | (PF13560) | ||||
| 680198.SCAB_84521 | (PF02784) | ||||
| 680198.SCAB_26741 | (PF08376) | ||||
| 680198.SCAB_9951 | (PF03995) | ||||
| 680198.SCAB_0311 | (PF13560) | ||||
| 680198.SCAB_49771 | (PF01636) | ||||
| 680198.SCAB_49551 | (PF13377) | ||||
| 680198.SCAB_73691 | (PF03259) | ||||
| 680198.SCAB_88231 | PF00161 | ||||
| 680198.SCAB_35841 | (PF07728) | ||||
| 680198.SCAB_8121 | (PF02342) | ||||
| 680198.SCAB_43091 | (PF07786) | ||||
| 680198.SCAB_13711 | (PF14378) | ||||
| 680198.SCAB_46381 | (PF13377) | ||||
| 680198.SCAB_65971 | (PF07728) | ||||
| 680198.SCAB_64621 | (PF13560) |
Detailed merged results for each protein sequence
- Detailed merged results as table (merge_results.html)
- Detailed merged results as tab delimited file (merge_results.csv)
Individual results for each protein sequence
- EffectiveELD predictions (PROTEINS.ELD.TXT)
- Predotar predictions using animal/human model (Predotar_output_modelANIMAL.TXT)
- Predotar predictions using plant model (Predotar_output_modelPLANT.TXT)
Genome based results
Summary
- Gram negative: NO (FDR = 0.5 %)
- Functional Type III secretion system: N.D.
- Functional Type IV secretion system: NO (FDR = 7.2 %)
- Functional Type VI secretion system: N.D.
Individual results for each secretion system
Parameters:
==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================
Release announcements
News
Latest publications
Contact
- +43 1 4277 76681
- +43 1 4277 876681
- contact.cube@univie.ac.at
